nf-core / coproidLinks
Coprolite host Identification pipeline
☆12Updated last week
Alternatives and similar repositories for coproid
Users that are interested in coproid are comparing it to the libraries listed below
Sorting:
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆9Updated 11 months ago
- Analysis of inference methods on standard population models☆25Updated 3 years ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Workflow for processing Illumina sequencing runs for ancient human DNA☆22Updated 4 years ago
- deep learning prediction of geographic location from individual genome sequences☆51Updated 6 months ago
- Fast and simple simulation-based population genetic inference in R☆27Updated last week
- ☆43Updated 4 months ago
- Method for dating admixture in ancient DNA specimens☆27Updated 3 years ago
- Amplicon sequence processing workflow using QIIME 2 and Snakemake☆47Updated 3 weeks ago
- AMPtk: Amplicon ToolKit for NGS data (formally UFITS)☆38Updated last year
- Population genetic simulations in R 🌍☆59Updated last week
- Repository containing lists of all published ancient metagenomic (and related) samples and libraries☆73Updated 3 weeks ago
- ☆20Updated 2 years ago
- An R package for reproducible and automated ADMIXTOOLS analyses☆33Updated 5 months ago
- ☆13Updated last year
- Mitohelper: a mitochondrial reference sequence analysis tool for fish eDNA studies☆19Updated 4 months ago
- ☆52Updated 3 years ago
- functions for analyzing phyloseq data☆28Updated 5 months ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Updated 4 months ago
- Genome wide orthology inference and dNdS estimation☆95Updated last year
- ☆20Updated last year
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆64Updated last week
- method for modeling continuous and discrete population genetic structure☆36Updated last year
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- microhaplotype visualizer and analyzer☆19Updated 4 years ago
- Tools for visualising microbial community amplicon data☆67Updated 3 months ago
- A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop☆15Updated 4 years ago
- Metagenomic AnalySis with QUantitative pipEline☆12Updated 6 years ago
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆43Updated 3 months ago
- ☆30Updated last month