☆53May 12, 2026Updated 3 months ago
Alternatives and similar repositories for sequenceTools
Users that are interested in sequenceTools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Oct 19, 2023Updated 2 years ago
- Maximum a posteriori estimate of contamination for ancient samples☆25Aug 6, 2026Updated 3 weeks ago
- Method for dating admixture in ancient DNA specimens☆33Jan 12, 2022Updated 4 years ago
- Software to call ROHs☆20Updated this week
- Workflow for processing Illumina sequencing runs for ancient human DNA☆28Oct 29, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆100Jun 28, 2026Updated 2 months ago
- ☆24Jun 9, 2021Updated 5 years ago
- ☆18Dec 3, 2024Updated last year
- Tools test whether admixture occurred and more☆232Jul 13, 2026Updated last month
- AncestralPaths is a local ancestry painting technique based on genealogies produced by RELATE. The method aims to assign 'path' ancestrie…☆11Jun 29, 2023Updated 3 years ago
- A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.☆14May 3, 2019Updated 7 years ago
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆48Jul 27, 2023Updated 3 years ago
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆17Aug 6, 2024Updated 2 years ago
- Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.☆11Mar 27, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆19Jun 28, 2025Updated last year
- Suite of tools for pangenomics built using vg☆25Mar 6, 2026Updated 5 months ago
- A fully reproducible and state-of-the-art ancient DNA analysis pipeline☆213Aug 7, 2026Updated 3 weeks ago
- The Poseidon Community Archive (PCA). Download from here: https://server.poseidon-adna.org/explorer/community-archive NOT through the G…☆18Aug 14, 2026Updated 2 weeks ago
- A merged read deduplication tool capable to perform merged read deduplication on single end data.☆14Sep 4, 2024Updated last year
- Inference of population structure from time-series genotype data☆15Jul 9, 2019Updated 7 years ago
- A workflow for integrating ancient lineages into present-day phylogenies.☆32Jul 24, 2026Updated last month
- A course with Jupyter Notebooks for Computational Population Genetics☆10Sep 4, 2022Updated 3 years ago
- mapping pipeline for ancient DNA☆35Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Eigen tools by Nick Patterson and Alkes Price lab☆207Jul 20, 2026Updated last month
- Fast, Accurate and Memory-Efficient Principal Component Analysis All in One For Large-scale Dataset☆54Jul 10, 2026Updated last month
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Aug 25, 2022Updated 4 years ago
- ☆71Dec 5, 2022Updated 3 years ago
- A Java based tool to determine damage patterns on ancient DNA as a replacement for mapDamage☆22Nov 18, 2023Updated 2 years ago
- Genotype likelihood simulator for VCF/BCF files☆17May 7, 2025Updated last year
- Experimental EIGENSOFT performance improvements.☆22Nov 1, 2014Updated 11 years ago
- Time-stratified f-statistics☆17Aug 1, 2025Updated last year
- Genome Analysis Workshop (Jena 2016) material☆18Aug 14, 2026Updated 2 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆15May 30, 2024Updated 2 years ago
- ☆51Jun 26, 2026Updated 2 months ago
- ☆16Feb 11, 2022Updated 4 years ago
- Processing WGS aDNA data using the ReichLab protocol☆13Mar 8, 2019Updated 7 years ago
- BITE: BioInformatics tools for everyone☆22Jul 25, 2024Updated 2 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆51Jul 22, 2026Updated last month
- mapDamage: tracking and quantifying damage patterns in ancient DNA sequences☆51Jul 14, 2025Updated last year