This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis, with a particular emphasis on population genetics.
☆17Jul 17, 2026Updated last month
Alternatives and similar repositories for comp_human_adna_book
Users that are interested in comp_human_adna_book are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software to call ROHs☆20Aug 26, 2026Updated last week
- The Poseidon Community Archive (PCA). Download from here: https://server.poseidon-adna.org/explorer/community-archive NOT through the G…☆18Updated this week
- Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.☆15Aug 14, 2026Updated 3 weeks ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Feb 27, 2025Updated last year
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆17Aug 6, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆18Dec 3, 2024Updated last year
- Workflow for processing Illumina sequencing runs for ancient human DNA☆28Oct 29, 2020Updated 5 years ago
- An aDNA aware short-read mapper☆22Apr 22, 2026Updated 4 months ago
- ☆16Feb 11, 2022Updated 4 years ago
- A fully reproducible and state-of-the-art ancient DNA analysis pipeline☆213Updated this week
- Suite of tools for pangenomics built using vg☆25Mar 6, 2026Updated 6 months ago
- Introduction to Ancient Metagenomics Book☆16Aug 31, 2026Updated last week
- Free mtDNA Haplogroup Classification Service☆36Jun 9, 2026Updated 2 months ago
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆13Jul 28, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- mapping pipeline for ancient DNA☆35Updated this week
- ☆100Jun 28, 2026Updated 2 months ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13May 11, 2024Updated 2 years ago
- Scripts for going from raw .fastq files to processed and quality-checked .bam files for downstream analysis☆14Nov 23, 2021Updated 4 years ago
- A post-mapping authentication toolkit for ancient metagenomics☆22Mar 30, 2026Updated 5 months ago
- Population Genomics in R workshop☆13Mar 24, 2024Updated 2 years ago
- Repository containing lists of all published ancient metagenomic (and related) samples and libraries☆85Jul 20, 2026Updated last month
- A workflow for integrating ancient lineages into present-day phylogenies.☆32Jul 24, 2026Updated last month
- ☆13Oct 19, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Course in population genomics at BiRC☆12Mar 18, 2026Updated 5 months ago
- Predicts adaptive introgression using a CNN trained on genotype matrices.☆17Nov 28, 2023Updated 2 years ago
- ☆49Oct 17, 2025Updated 10 months ago
- This project is a collection of tools for bioinformatic processing of ancient DNA data at the Harvard Medical School Reich Lab.☆30Aug 21, 2026Updated 2 weeks ago
- Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.☆11Mar 27, 2020Updated 6 years ago
- ☆20Sep 20, 2021Updated 4 years ago
- BITE: BioInformatics tools for everyone☆22Jul 25, 2024Updated 2 years ago
- A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.☆14May 3, 2019Updated 7 years ago
- This workshop, organised on behalf of the CAA-SIG "Scientific Scripting Languages in Archaeology", offers a low-level introduction to R p…☆22Jun 19, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Demographic analysis of Brassica oleracea☆10May 19, 2026Updated 3 months ago
- ☆16Aug 25, 2026Updated last week
- Partitioning algorithm developed for LAVA☆17May 17, 2024Updated 2 years ago
- Scripts for analysis used during the course☆98Apr 30, 2024Updated 2 years ago
- A python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at…☆16May 2, 2023Updated 3 years ago
- REMoving Bias from Rna-seq ANalysis of Differential Transcript Stability☆15Dec 16, 2023Updated 2 years ago
- ☆13Aug 18, 2023Updated 3 years ago