ANGSD / NgsRelateLinks
☆44Updated 8 months ago
Alternatives and similar repositories for NgsRelate
Users that are interested in NgsRelate are comparing it to the libraries listed below
Sorting:
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆29Updated 6 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆56Updated 5 months ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated 3 weeks ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆43Updated 6 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 7 years ago
- ☆17Updated 10 years ago
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 4 months ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 3 years ago
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- Make Pseudo-Reference Genome from VCF/BCF☆14Updated 5 years ago
- An R interface for the ADMIXTOOLS software☆34Updated 2 weeks ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆18Updated 8 years ago
- ☆30Updated 3 years ago
- Tools and Utilities for msmc and msmc2☆49Updated 4 months ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆25Updated 5 years ago
- Copy number variation detection using NGS data.☆18Updated 2 years ago
- Methods for examining PCA locally along the genome.☆86Updated last year
- Tutorial on using popular tools for learning about population history☆52Updated 7 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆68Updated last month
- Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework☆47Updated 2 years ago
- A statistical framework for ploidy estimation using NGS short-read data☆62Updated 7 years ago
- Infer demographic history with the Moran model☆50Updated 5 months ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago