Software to call ROHs
☆20Apr 9, 2026Updated 2 months ago
Alternatives and similar repositories for hapROH
Users that are interested in hapROH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Oct 19, 2023Updated 2 years ago
- ☆52May 12, 2026Updated last month
- The Poseidon Community Archive (PCA). Download from here: https://server.poseidon-adna.org/explorer/community-archive NOT through the G…☆15May 18, 2026Updated 3 weeks ago
- An aDNA aware short-read mapper☆22Apr 22, 2026Updated last month
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆15Aug 6, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Workflow for processing Illumina sequencing runs for ancient human DNA☆26Oct 29, 2020Updated 5 years ago
- gargammel is an ancient DNA simulator☆39Jul 22, 2024Updated last year
- Compute postmortem damage patterns and decontaminate ancient genomes☆21Apr 20, 2021Updated 5 years ago
- ☆23Mar 27, 2026Updated 2 months ago
- Inference of population structure from time-series genotype data☆15Jul 9, 2019Updated 6 years ago
- Experimental EIGENSOFT performance improvements.☆21Nov 1, 2014Updated 11 years ago
- Maximum a posteriori estimate of contamination for ancient samples☆24Nov 4, 2025Updated 7 months ago
- Simulate spatial data☆27May 26, 2026Updated 2 weeks ago
- Processing WGS aDNA data using the ReichLab protocol☆13Mar 8, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A workflow for integrating ancient lineages into present-day phylogenies.☆32Jul 7, 2025Updated 11 months ago
- ☆19Sep 20, 2021Updated 4 years ago
- ☆47May 16, 2026Updated 3 weeks ago
- ☆16Oct 17, 2024Updated last year
- ☆23Jun 9, 2021Updated 5 years ago
- This workshop, organised on behalf of the CAA-SIG "Scientific Scripting Languages in Archaeology", offers a low-level introduction to R p…☆22Jun 19, 2021Updated 4 years ago
- R functions related to pedigrees☆14Sep 29, 2025Updated 8 months ago
- A fully reproducible and state-of-the-art ancient DNA analysis pipeline☆206Apr 30, 2026Updated last month
- a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.☆25Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An assistive shiny application toolkit built for scaling and standardizing application development☆18Jan 29, 2025Updated last year
- Method for dating admixture in ancient DNA specimens☆33Jan 12, 2022Updated 4 years ago
- R Package - Spatiotemporal Data Interpolation and Visualisation based on 3D Tessellation☆15Sep 15, 2021Updated 4 years ago
- ☆11Dec 1, 2020Updated 5 years ago
- Tools test whether admixture occurred and more☆230May 5, 2026Updated last month
- Plasmid and antimicrobial resistance pipeline☆16Apr 30, 2026Updated last month
- mapping pipeline for ancient DNA☆34Feb 20, 2026Updated 3 months ago
- source of chrome extension "the paper link - tpl" for PubMed☆20Feb 26, 2026Updated 3 months ago
- ☆15Mar 13, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- software for the MAPS method☆25Mar 20, 2019Updated 7 years ago
- ☆97Jun 2, 2026Updated last week
- A simple tool to calculate metrics from a BAM file and filter references with uneven coverages☆22Apr 24, 2026Updated last month
- Experimental String Graph construction and processing☆26Aug 14, 2023Updated 2 years ago
- ☆16Feb 11, 2022Updated 4 years ago
- Suite of tools for pangenomics built using vg☆25Mar 6, 2026Updated 3 months ago
- ☆13Oct 13, 2023Updated 2 years ago