hringbauer / hapROHLinks
Software to call ROHs
☆17Updated this week
Alternatives and similar repositories for hapROH
Users that are interested in hapROH are comparing it to the libraries listed below
Sorting:
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- An R package for reproducible and automated ADMIXTOOLS analyses☆33Updated 7 months ago
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆10Updated last year
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Updated 7 months ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆24Updated 4 years ago
- SEEKIN: SEquence-based Estimation of KINship☆14Updated 8 years ago
- ☆20Updated last year
- EM-PCA for Ultra-low Coverage Sequencing Data☆18Updated last month
- ☆44Updated 6 months ago
- Experimental EIGENSOFT performance improvements.☆21Updated 10 years ago
- A course with Jupyter Notebooks for Computational Population Genetics☆10Updated 3 years ago
- ☆12Updated last year
- Analysis of inference methods on standard population models☆25Updated 3 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆64Updated 2 weeks ago
- Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)☆15Updated 2 years ago
- https://filippob.github.io/introduction_to_gwas/☆21Updated 3 months ago
- Module for analysing admixture graphs☆28Updated 7 years ago
- Method for dating admixture in ancient DNA specimens☆28Updated 3 years ago
- ☆31Updated 3 weeks ago
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆43Updated 6 months ago
- Population genetic simulations in R 🌍☆60Updated last month
- The flare program performs local ancestry inference☆40Updated 2 months ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆42Updated 2 months ago
- Repository for pipeline code☆26Updated last year
- ☆13Updated 2 years ago
- Fast and simple simulation-based population genetic inference in R☆26Updated 3 months ago
- Single-header C++ library for fast/low-memory VCF (Variant Call Format) parsing.☆17Updated last week
- ☆15Updated 5 years ago
- Perform GWAS using the FarmCPU model.☆24Updated 9 months ago
- Population Genomics in R workshop☆12Updated last year