stschiff / GAworkshopLinks
Genome Analysis Workshop (Jena 2016) material
☆18Updated 8 years ago
Alternatives and similar repositories for GAworkshop
Users that are interested in GAworkshop are comparing it to the libraries listed below
Sorting:
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- The GitHub for CLUES2, a method for inferring and evaluating evidence for selection.☆15Updated 4 months ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- A tool to calculate ploidy levels from genotype likelihoods and coverage using Hidden Markov Models☆18Updated 2 years ago
- Genealogical Estimation of Variant Age (GEVA)☆30Updated 3 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- Automated and distributed population genetic model inference from allele frequency spectra☆18Updated 3 weeks ago
- ☆13Updated last year
- The MafFilter genome alignment processor☆19Updated 3 months ago
- Analyze and simulate Pool-Seq time series data☆15Updated 3 years ago
- machine learning applications for dadi☆15Updated 7 months ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 5 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago
- ☆43Updated 3 months ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 7 years ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆19Updated 5 years ago
- ☆27Updated last week
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Updated 6 months ago
- Likelihood-based Selective Sweep Detection☆40Updated last year
- TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.☆13Updated 4 years ago
- ☆15Updated 5 years ago
- Haplotype and population structure inference using neural networks.☆27Updated 9 months ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆33Updated 2 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆20Updated 6 years ago
- ☆14Updated last year
- ☆22Updated 6 years ago
- Sampling and inference of genealogies with recombination☆32Updated 2 months ago
- ☆42Updated last year
- scripts used to analyse horizontal transfer and evolution of transposable elements in 307 vertebrate species☆10Updated 4 years ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆18Updated 4 years ago