YanCCscu / MEANGSLinks
MitoDNA extending assembler from NGS data
☆22Updated 5 months ago
Alternatives and similar repositories for MEANGS
Users that are interested in MEANGS are comparing it to the libraries listed below
Sorting:
- Genome Annotation Pipeline☆43Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆52Updated 8 months ago
- ☆45Updated 3 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆41Updated this week
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆35Updated last year
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆53Updated 5 months ago
- BITACORA: A Bioinformatics tool for gene family annotation☆53Updated 2 months ago
- MCMCtree tutorials☆28Updated last year
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated last year
- ☆41Updated 2 years ago
- A snakemake workflow for de novo genome assembly. It produces chromosome-scale primary/phased assemblies complete with organelles (mitoch…☆32Updated 8 months ago
- STAG: Species Tree from All Genes☆35Updated 7 years ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Updated 2 years ago
- A tool for evaluating long-read de novo assembly results☆52Updated last year
- Convergent substitution detection tool based on the PCOC model☆31Updated 4 years ago
- Portable solution to generate genome alignment chains using lastz☆60Updated last month
- TSEBRA: Transcript Selector for BRAKER☆49Updated 2 months ago
- ☆45Updated 2 months ago
- Robust identification of orthologous Synteny with the Orthology Index☆38Updated last week
- A shiny application to visualize MCscan result☆38Updated 3 years ago
- ☆33Updated 10 months ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Updated 2 years ago
- An R package to visualize chromosome scale repeat patterns and predict centromere locations.☆44Updated 3 months ago
- Multi-genome synteny block visualization tool☆52Updated last week
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆36Updated 3 years ago
- Phylogenomics from Low-coverage Whole-genome Sequencing☆39Updated 5 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- Neural network classification of TE☆97Updated 4 months ago
- An efficient assembly tool for plant mitochondrial genome☆69Updated last year
- ☆89Updated 2 months ago