Alternatives and similar repositories for Arabidopsis-Pollen:

Users that are interested in Arabidopsis-Pollen are comparing it to the libraries listed below

• Xinglab / isoCirc
  isoCirc
  ☆10Updated last year
• zhailab / polyAcaller
  ☆10Updated 4 years ago
• smlmbrt / SimilarityRegression
  Predicting TF sequence-specificity similarity with weighted alignments
  ☆12Updated 5 years ago
• menghaowei / Detect-seq
  An unbiased method for genome-wide CBE off-targets assessment
  ☆13Updated last year
• djhn75 / RNAEditor
  ☆14Updated 2 years ago
• flemingtonlab / SpliceTools
  ☆18Updated 6 months ago
• PoolLab / ReferenceEnhancer
  ☆20Updated last year
• maxsonBraunLab / gopeaks
  Peak caller for CUT&TAG data
  ☆25Updated 2 years ago
• aertslab / scATAC-seq_benchmark
  ☆16Updated last year
• ConesaLab / acorde
  Isoform co-usage networks from single-cell RNA-seq data
  ☆15Updated 11 months ago
• Xinglab / rMATS-long
  ☆25Updated last month
• YeoLab / rbp-maps
  splicing and feature maps for RBPs
  ☆24Updated 2 years ago
• bioinfo-biols / Code_for_circSC
  Analysis pipeline for our circSC manuscript
  ☆12Updated 2 years ago
• AngelCampos / txtools
  An R package to process and analyze transcriptomic data
  ☆16Updated 4 months ago
• Xinglab / CLAM
  CLIP-seq Analysis of Multi-mapped reads
  ☆29Updated 3 years ago
• HenrikBengtsson / TopDom
  R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes
  ☆19Updated last year
• AdelmanLab / NIH_scripts
  A collection of perl scripts for NGS analysis
  ☆12Updated 3 months ago
• hancockinformatics / pathlinkR
  Analysis and visualization of RNA-Seq results
  ☆25Updated last month
• liulab-dfci / TRUST4_manuscript_evaluation
  TRUST4 manuscript evaluation
  ☆14Updated 2 years ago
• landau-lab / Gotcha
  Pipeline for processing of GoT-ChA genotyping data and downstream analysis
  ☆13Updated last year
• ans4013 / ScisorWiz
  ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data
  ☆15Updated 9 months ago
• Gregor-Mendel-Institute / bookend
  End-guided RNA assembler
  ☆15Updated 2 months ago
• a-velt / Mfuzz_RNAseq
  A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.
  ☆18Updated 5 years ago
• huyustats / SCATS
  A statistical tool to detect differential alternative splicing events using single-cell RNA-seq
  ☆21Updated last year
• parklab / SCAN2
  SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)
  ☆11Updated 5 months ago
• CraigIDent / SpliSER
  Bioinformatic tool for Splice site Strength Estimation using RNA-seq
  ☆14Updated 2 years ago
• frattalab / splicing
  Snakemake pipeline for running MAJIQ
  ☆19Updated last year
• juliaolivieri / SpliZ_pipeline
  Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis
  ☆30Updated 3 years ago
• rnakato / DROMPAplus
  ChIP-seq pipeline tool for quality check, normalization, statistical analysis, and visualization of multiple ChIP-seq samples.
  ☆22Updated 5 months ago
• wenweixiong / MARVEL
  ☆44Updated 5 months ago