LUMC / fastqsplitterLinks
Splits fastq files evenly
☆21Updated 4 years ago
Alternatives and similar repositories for fastqsplitter
Users that are interested in fastqsplitter are comparing it to the libraries listed below
Sorting:
- Long-read Isoform Quantification and Analysis☆38Updated 3 months ago
- Comparison of Hi-C Experiments using Structural Similarity.☆28Updated last year
- A Python library to visualize and analyze long-read transcriptomes☆62Updated 2 months ago
- HiC for copy Number variation and Translocation detection☆39Updated 3 years ago
- A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains☆44Updated 2 years ago
- Software to compute reproducibility and quality scores for Hi-C data☆50Updated 6 years ago
- snakemake pipeline for Hi-C post-processing☆22Updated last year
- ☆36Updated 2 years ago
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Updated 3 years ago
- A deep-learning framework for predicting a full range of structural variations from bulk and single-cell contact maps☆59Updated last year
- dcHiC: Differential compartment analysis for Hi-C datasets☆69Updated last year
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆93Updated last month
- Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from…☆31Updated last month
- Annotation and segmentation of MAS-seq data☆20Updated 2 years ago
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated 2 years ago
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆31Updated last year
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆40Updated 11 months ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated 9 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆38Updated 5 months ago
- IDR☆31Updated 2 years ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆36Updated last month
- Main repository for Drews et al. (Nature, 2022)☆42Updated last year
- ☆23Updated 6 months ago
- Find and characterise transposable element insertions☆21Updated 2 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated last year
- Workflow for Nanopore Sequencing of 10x single cell libraries☆19Updated 3 months ago
- An Optimized Nested TAD caller for Hi-C data☆22Updated 4 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- ☆61Updated 11 months ago