liulab-dfci / TRUST4_manuscript_evaluation
TRUST4 manuscript evaluation
☆14Updated 2 years ago
Alternatives and similar repositories for TRUST4_manuscript_evaluation:
Users that are interested in TRUST4_manuscript_evaluation are comparing it to the libraries listed below
- Computational identification of targets for CAR-T cell therapy in AML☆16Updated 2 years ago
- Detecting cancer subtypes with machine learning.☆10Updated 5 years ago
- ☆12Updated 4 years ago
- ☆17Updated 2 years ago
- ☆10Updated 2 years ago
- ☆20Updated last year
- Code associated with MIX-seq manuscript☆15Updated 4 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆14Updated 2 years ago
- Analysis pipeline for our circSC manuscript☆13Updated 2 years ago
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Updated last year
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- ☆16Updated last year
- ☆23Updated 2 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- ☆12Updated 2 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- A collection of perl scripts for NGS analysis☆16Updated 6 months ago
- Paired-seq☆14Updated 9 months ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆32Updated 3 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- Advanced steps of the OSCA book☆13Updated last week
- ☆49Updated 8 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆41Updated last year
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆12Updated 8 months ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- Code required to reproduce analysis of the single cell Cut and Tag data in the resource paper (Bartosovic et. al., 2020)☆11Updated 3 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago