☆23May 1, 2025Updated last year
Alternatives and similar repositories for aics-shparam
Users that are interested in aics-shparam are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆33May 29, 2026Updated last month
- Analysis of data produced by cvapipe for the variance paper☆24Dec 23, 2024Updated last year
- ☆10Aug 22, 2020Updated 5 years ago
- ☆14Jan 27, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automated Cell Toolkit☆24Oct 15, 2025Updated 9 months ago
- MorphoFeatures code and data☆23May 11, 2026Updated 2 months ago
- Tools for handling FIB-SEM data and annotations☆21Apr 4, 2025Updated last year
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆61Apr 24, 2026Updated 2 months ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆74Sep 29, 2024Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Updated this week
- 3D/4D volumetric rendering of microscopy data☆27Updated this week
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆27Jul 22, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Explainable AI model of cell behavior☆20Apr 4, 2023Updated 3 years ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31May 28, 2026Updated last month
- Package providing bioimaging functionality using TileDB. Source of the tiledb-bioimg Python package.☆19Dec 17, 2025Updated 7 months ago
- Conditional Autoencoders for Multiplexed Pixel Analysis☆19Nov 25, 2022Updated 3 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 3 years ago
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year
- Process images using SimpleITK in napari☆23May 1, 2025Updated last year
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- scGRO-seq analyses codes☆13Jan 9, 2024Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆22Aug 17, 2023Updated 2 years ago
- Spheroid models of morphogenesis for the GPU.☆46Oct 12, 2025Updated 9 months ago
- Browse, share, and publish OME-Zarr data☆29Updated this week
- A Python package using Gromov-Wasserstein distance to compare cell shapes☆25Jun 15, 2026Updated last month
- ☆45Jul 10, 2026Updated last week
- A napari plugin to analysis point spread functions.☆11Apr 27, 2026Updated 2 months ago
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆28Sep 19, 2019Updated 6 years ago
- Paint segmentations directly to on-disk/remote zarr arrays☆16Mar 25, 2026Updated 3 months ago
- TRUST4 manuscript evaluation☆17Jul 8, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Time arrow prediction for live-cell microscopy☆22Jun 17, 2024Updated 2 years ago
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Jul 13, 2026Updated last week
- A curated list of awesome Janelia software☆17Feb 26, 2025Updated last year
- Segment images utilizing pre-trained neural networks as feature extractors☆52Jul 3, 2026Updated 2 weeks ago
- ☆13Dec 7, 2020Updated 5 years ago
- ☆29Apr 26, 2024Updated 2 years ago