☆22May 1, 2025Updated 11 months ago
Alternatives and similar repositories for aics-shparam
Users that are interested in aics-shparam are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆33Mar 12, 2026Updated last month
- Analysis of data produced by cvapipe for the variance paper☆24Dec 23, 2024Updated last year
- ☆10Aug 22, 2020Updated 5 years ago
- ☆14Jan 27, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Automated Cell Toolkit☆24Oct 15, 2025Updated 6 months ago
- Tools for handling FIB-SEM data and annotations☆21Apr 4, 2025Updated last year
- MorphoFeatures code and data☆22May 4, 2023Updated 2 years ago
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- SplineDist: Automated Cell Segmentation with Spline Curves☆72Sep 29, 2024Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆18Apr 20, 2026Updated last week
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆60Updated this week
- 3D/4D volumetric rendering of microscopy data☆27Apr 15, 2026Updated 2 weeks ago
- ☆22Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆26Jul 22, 2024Updated last year
- Explainable AI model of cell behavior☆20Apr 4, 2023Updated 3 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- Process images using SimpleITK in napari☆23May 1, 2025Updated 11 months ago
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- scGRO-seq analyses codes☆13Jan 9, 2024Updated 2 years ago
- Spheroid models of morphogenesis for the GPU.☆46Oct 12, 2025Updated 6 months ago
- ☆22Aug 17, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Scripts for building, training and validating CNNs for Connectomics☆12Mar 24, 2023Updated 3 years ago
- Conditional Autoencoders for Multiplexed Pixel Analysis☆18Nov 25, 2022Updated 3 years ago
- Package providing bioimaging functionality using TileDB. Source of the tiledb-bioimg Python package.☆18Dec 17, 2025Updated 4 months ago
- A Python package using Gromov-Wasserstein distance to compare cell shapes☆22Mar 29, 2026Updated last month
- ☆42Apr 15, 2026Updated 2 weeks ago
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆27Sep 19, 2019Updated 6 years ago
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- A napari plugin to analysis point spread functions.☆12Updated this week
- Paint segmentations directly to on-disk/remote zarr arrays☆16Mar 25, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- TRUST4 manuscript evaluation☆17Jul 8, 2022Updated 3 years ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Updated this week
- A portal for viewing FIB-SEM datasets☆13Apr 14, 2026Updated 2 weeks ago
- A curated list of awesome Janelia software☆17Feb 26, 2025Updated last year
- ☆13Dec 7, 2020Updated 5 years ago
- ☆29Apr 26, 2024Updated 2 years ago
- ☆13Mar 29, 2024Updated 2 years ago