BKI-immuno / neoantigen-specific-T-cells-NSCLCLinks
☆19Updated 4 years ago
Alternatives and similar repositories for neoantigen-specific-T-cells-NSCLC
Users that are interested in neoantigen-specific-T-cells-NSCLC are comparing it to the libraries listed below
Sorting:
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 11 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 10 months ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆42Updated last year
- ☆60Updated last year
- Gene regulatory network containing signed transcription factor-target gene interactions☆90Updated 5 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Functional Inference of Gene Regulation☆49Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- Gene group activity utility functions for Scanpy☆95Updated 11 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated 3 months ago
- All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs☆41Updated 2 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated last week
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆32Updated last year
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- ☆39Updated 4 months ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆26Updated last year
- scWGCNA☆61Updated 3 years ago
- R package for pathway analysis in scRNA-seq data☆76Updated last year
- ☆60Updated 2 months ago
- Bostongene cell deconvolution algorithm from RNAseq☆58Updated last year
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Updated 3 years ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- Tools used in Human Cell Landscape(HCL)☆56Updated 5 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆56Updated 5 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 2 months ago
- Collection of scripts for analysis of pan fetal immune atlas☆28Updated 3 years ago