Scripts for antiSMASH/MiBIG data extraction and manipulation
☆14May 23, 2024Updated 2 years ago
Alternatives and similar repositories for astool
Users that are interested in astool are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆106Oct 15, 2026Updated 3 weeks ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆55May 16, 2026Updated 5 months ago
- BiGMeC - Biosynthetic Gene cluster Metabolic pathway Constructor☆18May 14, 2023Updated 3 years ago
- ☆18Jun 5, 2026Updated 5 months ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆32Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆10Aug 31, 2018Updated 8 years ago
- lsaBGC - suite for pan-BGC-omics analysis☆23Nov 21, 2025Updated 11 months ago
- A comprehensive prokaryotic genome annotation pipeline☆93Oct 12, 2026Updated 3 weeks ago
- LinearDisplay.pl is a program that generates publication quality linear maps of user-defined genetic features (e.g., ORFs, promoters, tra…☆10Apr 2, 2025Updated last year
- Integrated Network Analysis Pipeline☆19Dec 19, 2024Updated last year
- Flexible pipeline for building Sequence Similarity Networks, Genome Neighborhood Networks, and Genome Neighborhood Diagrams for the purpo…☆12Updated this week
- Automatic Assembly For The Fungi☆29Updated this week
- antiSMASH☆271Updated this week
- Bioinformatic Tools for study Evolution of metabolic diversity☆42Feb 27, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆14Jun 1, 2026Updated 5 months ago
- Similarity networks of biosynthetic gene clusters☆183Oct 5, 2026Updated last month
- Genome mining tool for novel RiPP BGCs☆16Jul 6, 2023Updated 3 years ago
- ☆14Jan 8, 2020Updated 6 years ago
- Generate de novo taxonomy of full length 16S rRNA sequences directly from environmental samples☆20Nov 23, 2024Updated last year
- Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Sec…☆17May 24, 2023Updated 3 years ago
- A python framework for microbial natural products data mining by integrating genomics and metabolomics data☆29May 2, 2026Updated 6 months ago
- Scripts and utilities for pangenomic/phylogenomic analysis of prokaryotic genomes. Scripts for the analysis of genomic features such as C…☆13May 28, 2021Updated 5 years ago
- Attentive deep learning model for antimicrobial peptide prediction☆64Sep 28, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆110Jun 25, 2023Updated 3 years ago
- Build Annotation package by using information from KEGG, NCBI, Ensembl☆16May 4, 2023Updated 3 years ago
- (Meta-)genome screening for functional and natural product gene sequences☆119Updated this week
- BiG-MEx implementation as Docker images and R packages☆13Feb 9, 2022Updated 4 years ago
- ☆19Mar 20, 2025Updated last year
- Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes.☆14Feb 24, 2025Updated last year
- GEne Cluster prediction with COnditional random fields.☆91Jul 29, 2026Updated 3 months ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆92Oct 27, 2026Updated last week
- ☆20Mar 29, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!☆46Sep 30, 2026Updated last month
- Python script to upload bins and MAGs to ENA (European Nucleotide Archive)☆24Updated this week
- ☆19Jan 12, 2026Updated 9 months ago
- Count and compare 16S rRNA genes within a genus☆17Aug 1, 2024Updated 2 years ago
- This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.☆18Mar 16, 2026Updated 7 months ago
- Hydrocarbon biodegradation gene annotation☆20Jul 14, 2022Updated 4 years ago
- Predict AMPs in (meta)genomes and peptides☆98Jul 19, 2026Updated 3 months ago