☆13Jan 8, 2020Updated 6 years ago
Alternatives and similar repositories for snakemake-tutorial
Users that are interested in snakemake-tutorial are comparing it to the libraries listed below
Sorting:
- Mobile Genetic Elements Retrieving Tool☆16Feb 11, 2026Updated 2 weeks ago
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆15Jun 26, 2018Updated 7 years ago
- tutorials for 2015 EDAMAME☆24Aug 9, 2017Updated 8 years ago
- ☆40Sep 14, 2016Updated 9 years ago
- ☆22May 26, 2021Updated 4 years ago
- R vignettes/pkgdown for elementary statistics for a summer course☆14Jan 9, 2025Updated last year
- Reference-quality genome reconstruction from complex metagenomes (or bacterial isolates) using only Nanopore long reads or both long and …☆33Oct 17, 2023Updated 2 years ago
- Original materials for the "Introduction to Solving Biological Problems with Python" 2 days course☆10Jun 25, 2018Updated 7 years ago
- Fast, accurate taxonomic assignments for the human vaginal microbiota☆11Feb 11, 2026Updated 2 weeks ago
- ☆13Sep 20, 2024Updated last year
- nanodisco: a toolbox for discovering and exploiting multiple types of DNA methylation from individual bacteria and microbiomes using nano…☆73May 20, 2022Updated 3 years ago
- Simulation of NREL 5MW reference turbine using turbinesFoam.☆11Nov 2, 2018Updated 7 years ago
- ☆11Oct 6, 2025Updated 4 months ago
- Graph-based assembly phasing☆91Nov 25, 2025Updated 3 months ago
- A Snakefile to parallelize bwa.☆13Oct 25, 2013Updated 12 years ago
- visualization tools for exon/junction coverage☆11Dec 30, 2019Updated 6 years ago
- 🧬 Unique (& conserved) DNA sequence identification☆14Jul 7, 2025Updated 7 months ago
- Adapted OS for e-ink tablets - allows to use work-related apps with no harm for eyes☆11May 17, 2020Updated 5 years ago
- ☆10Aug 28, 2025Updated 6 months ago
- A R tool to parse and visualize chloroplast genomes☆12Dec 1, 2021Updated 4 years ago
- Lecture on viral phylodynamics☆11Oct 28, 2021Updated 4 years ago
- Material for a workshop on reproducible science with R and RStudio☆14May 22, 2022Updated 3 years ago
- Bioinformatics Training Platform (BTP) Workshop: Introduction to NGS☆10Oct 31, 2018Updated 7 years ago
- ☆14Jun 11, 2020Updated 5 years ago
- Programs for performing various population genetic analyses☆11Dec 2, 2024Updated last year
- Scripts used in the publication Tyler P. Barnum, Israel A. Figueroa, Charlotte I. Carlström, Lauren N. Lucas, Anna L. Engelbrektson, and …☆10Jun 19, 2019Updated 6 years ago
- A collection of course materials, notes and assignments for the Masters of Information and Data Sciences program at UC Berkeley☆14Dec 15, 2019Updated 6 years ago
- ☆12Jun 18, 2025Updated 8 months ago
- Lesson for the shell for genomics☆10Jan 12, 2021Updated 5 years ago
- Site frequency spectrum estimation based on window expectation-maximisation algorithm☆16May 19, 2023Updated 2 years ago
- Analysing the genomic context of mobile genes☆11Jul 21, 2025Updated 7 months ago
- Exercises from the 'Bioinformatics Programming using Python' book by Mitchell L Model☆13Nov 6, 2011Updated 14 years ago
- Supplementary data for co-occurrence manuscript☆10Dec 19, 2019Updated 6 years ago
- A visualization tool to support reviewing the scientific literature☆14Jun 2, 2018Updated 7 years ago
- ☆10Apr 16, 2025Updated 10 months ago
- Pipeline detecting distant and putative novel insertion sequences in prokaryotic genomes☆13Jun 10, 2021Updated 4 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated last year
- Five pillars of computational reproducibility☆11Feb 6, 2024Updated 2 years ago
- Pangenome Analysis in Prokaryotes Lesson☆13Aug 20, 2024Updated last year