☆10Aug 31, 2018Updated 8 years ago
Alternatives and similar repositories for NAP_ProteoSAFe
Users that are interested in NAP_ProteoSAFe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Oct 4, 2021Updated 5 years ago
- ☆20Jul 12, 2023Updated 3 years ago
- Public Workflows at GNPS☆69Jan 30, 2024Updated 2 years ago
- ☆12Feb 20, 2026Updated 8 months ago
- Clustering of MS² Spectra for Metabolite Identification☆10Apr 2, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Scripts for antiSMASH/MiBIG data extraction and manipulation☆14May 23, 2024Updated 2 years ago
- A modular JavaScript viewer for mass spectrometry data☆12May 20, 2022Updated 4 years ago
- Documentation for GNPS and related tools as written in mkdocs☆46Apr 8, 2026Updated 6 months ago
- Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples☆35Apr 4, 2025Updated last year
- qiime2 plugin for aldex2 for differential abundance analysis☆11Mar 5, 2020Updated 6 years ago
- Metabolomics And Dereplication By Two-dimensional Experiments - MADByTE NMR Metabolomics Platform☆13Jul 23, 2025Updated last year
- Stray has been renamed fido, development continues at jsilve24/fido☆23Jan 26, 2022Updated 4 years ago
- Bioactive Molecular Networks Project☆18Nov 17, 2020Updated 5 years ago
- Calculation and visualization of molecular networks based on t-SNE algorithm☆36Jan 29, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Genome mining tool for novel RiPP BGCs☆16Jul 6, 2023Updated 3 years ago
- Multinomial Logistic-Normal Models (really fast)☆20Updated this week
- ☆14Dec 27, 2022Updated 3 years ago
- Formula IDentification from tandem mass spectra by Deep LEarning☆17Oct 24, 2026Updated last week
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆29Aug 19, 2022Updated 4 years ago
- exploratory and interactive microbiome analyses based on heatmaps☆27Jan 27, 2025Updated last year
- A structure-informed generative model for metabolite annotation based on MS2 spectra.☆16Aug 21, 2026Updated 2 months ago
- Neural networks for microbe-metabolite interaction analysis☆132Nov 4, 2022Updated 3 years ago
- The Multiplierz Proteomics Library☆24Apr 27, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- An extension of the ProteoWizard framework enabling the support of the mzDB format☆14Feb 12, 2021Updated 5 years ago
- Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder☆16Updated this week
- Metabolomics Spectrum Resolver/Displayer☆11Aug 31, 2026Updated 2 months ago
- Implementation of the SGNN graph neural network for 1H and 13C NMR prediction and a tool for distinguishing different molecules based on …☆18Sep 29, 2023Updated 3 years ago
- ALDEx tool to examine compositional high-throughput sequence data with Welch's t-test☆15Mar 7, 2019Updated 7 years ago
- TRACE protocol for auditing decision-provenance in AI-assisted scientific workflows☆25Updated this week
- Mass Spectrometry for Small Molecules using Deep Learning☆138Jun 30, 2021Updated 5 years ago
- Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022☆13Jan 8, 2024Updated 2 years ago
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆16Oct 4, 2026Updated 3 weeks ago
- Molecular fingerprint prediction from MS/MS (FingerID).☆20Feb 28, 2018Updated 8 years ago
- PRISM source code public releases☆11Feb 8, 2021Updated 5 years ago
- Flexible pipeline for building Sequence Similarity Networks, Genome Neighborhood Networks, and Genome Neighborhood Diagrams for the purpo…☆12Updated this week
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆106Oct 15, 2026Updated 2 weeks ago
- Pilea: profiling bacterial growth dynamics from metagenomes with sketching☆13Oct 21, 2026Updated last week
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆55May 16, 2026Updated 5 months ago