MGI-tech-bioinformatics / splitBarcodeLinks
barcode demultiplexing
☆21Updated 6 years ago
Alternatives and similar repositories for splitBarcode
Users that are interested in splitBarcode are comparing it to the libraries listed below
Sorting:
- BAMixChecker: A fast and efficient tool for sample matching checkup☆15Updated 3 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Updated 5 years ago
- Microsatellite instability (MSI) detection for cfDNA samples.☆19Updated 4 years ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆16Updated 3 months ago
- Read level DNA methylation analysis of bisulfite converted sequencing data☆18Updated 2 months ago
- wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data☆28Updated 3 years ago
- fastx-utils using klib☆19Updated 5 years ago
- HiCnv is used to call copy number variations and breakpoints from Hi-C data☆21Updated last year
- ☆23Updated 8 months ago
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Updated 3 years ago
- ☆25Updated last year
- ☆36Updated 2 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 7 years ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆23Updated 2 years ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- ☆27Updated 3 years ago
- Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV…☆21Updated 5 years ago
- mgikit is a collection of tools used to demultiplex fastq files and generate demultiplexing and quality reports.☆15Updated 3 weeks ago
- Long-read Isoform Quantification and Analysis☆38Updated 5 months ago
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- This repo is be archived, these workflows are still housed housed in the GATK repository under the scripts directory. The workflows are a…☆22Updated 5 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 4 years ago
- Updated and optimized fork of BSMAP☆22Updated 4 years ago
- Tools for processing and analyzing structural variants.☆33Updated 9 years ago
- ☆36Updated 6 years ago
- ☆51Updated 6 years ago
- A new tool to infer sex from massively parallel sequencing data.☆17Updated 3 months ago
- TNER: Tri-Nucleotide Error Reducer for ctDNA detection☆21Updated 6 years ago
- Automated human exome/genome variants detection from FASTQ files☆22Updated 3 years ago