Alternatives and similar repositories for NCBI-GenBank-file-parser

Users that are interested in NCBI-GenBank-file-parser are comparing it to the libraries listed below

• LeeBergstrand / Genbank-Downloaders
  A series of small Biopython scripts for downloading sequence data off NCBI's Genbank.
  ☆15Updated 8 years ago
• niaid / python_biologist
  Python Programming for Biologists
  ☆11Updated last week
• nasqar / NASQAR
  NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
  ☆32Updated 5 years ago
• NCBI-Hackathons / HLAClustRView
  R package specialized in HLA typing clustering and visualization based on specific similarity metrics
  ☆14Updated 5 years ago
• trvrb / phylodynamics-lecture
  Lecture on viral phylodynamics
  ☆12Updated 3 years ago
• bcgsc / SSAKE
  🍶 Genome assembly with short sequence reads
  ☆25Updated last year
• jsalignon / cactus
  Chromatin ACcessibility and Transcriptomics Unifying Software
  ☆17Updated 11 months ago
• VCCRI / dv-trio
  dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…
  ☆11Updated 4 years ago
• XPRESSyourself / XPRESSpipe
  An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data
  ☆13Updated last year
• lotharwissler / bioinformatics
  ☆10Updated 13 years ago
• fomightez / sequencework
  programs and scripts, mainly python, for analyses related to nucleic or protein sequences
  ☆24Updated last month
• gzhmat / ShinyCNV
  a Shiny/R application to view and annotate copy number variations
  ☆28Updated 2 years ago
• zhongzhd / ont_m6a_detection
  ☆10Updated 6 months ago
• danielfan / MuSE
  Somatic point mutation caller
  ☆17Updated 9 years ago
• saezlab / flop
  FunctionaL Omics Processing platform
  ☆13Updated last year
• NBISweden / IgDiscover-legacy
  Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads
  ☆16Updated last year
• ding-lab / BICSEQ2
  BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA
  ☆16Updated 4 years ago
• slncky / slncky
  slncky is a tool for lncRNA discovery from RNA-Seq data. slncky filters a high-quality set of noncoding transcripts, discovers lncRNA or…
  ☆12Updated 4 years ago
• jfjlaros / demultiplex
  Versatile FASTA/FASTQ demultiplexer.
  ☆33Updated last year
• ExpressionAnalysis / CNV_Radar
  CNV Rapid Aberration Detection And Reporting
  ☆12Updated 4 years ago
• JCVenterInstitute / PanGenomePipeline
  PanGenomePipeline
  ☆16Updated last year
• ICGC-TCGA-PanCancer / Seqware-BWA-Workflow
  This is the BWA workflow used in the PanCancer project used to allign all the BAM files.
  ☆11Updated 2 years ago
• bio-ontology-research-group / DeepSVP
  Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity
  ☆16Updated 3 years ago
• nch-cloud / snvstory
  Rapid and accurate ancestry inference using SNVs.
  ☆26Updated last month
• PersonalizedOncology / ClinVAP
  Clinical Variant Annotation Pipeline
  ☆10Updated 5 years ago
• HLee-Six / colon_microbiopsies
  Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"
  ☆11Updated 4 years ago
• ChandraPedamallu / PathSeq
  We present a customizable computational tool, PathSeq2.0, to enable the discovery and identification of microbial sequences in metagenomi…
  ☆11Updated 7 years ago
• Baldridge37 / RNAseq_with_Hisat2_stringtie
  RNAseq analysis with Hisat2, stringtie, and ballgown
  ☆17Updated 6 years ago
• apietrelli / myVCF
  myVCF: a web-based platform for target and exome mutations data management
  ☆20Updated 4 years ago
• HelloYiHan / DriverML
  ☆17Updated 3 years ago