Alternatives and similar repositories for GNPS_MASST

Users that are interested in GNPS_MASST are comparing it to the libraries listed below

• computational-metabolomics / structToolbox
  R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis m…
  ☆11Updated 7 months ago
• ANHIG / IPDMHC
  Github for files currently published in the IPD-MHC FTP Directory hosted at the European Bioinformatics Institute
  ☆16Updated 5 months ago
• biosustain / snakemake_UmetaFlow
  Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake
  ☆30Updated 11 months ago
• robinschmid / microbe_masst
  Using MASST or fastMASST, adding metadata onto a tree ontology for microbes
  ☆21Updated 3 weeks ago
• bio2bel / kegg
  A Bio2BEL package for integrating pathway-related information from KEGG in BEL
  ☆13Updated 3 years ago
• cwieder / PathIntegrate
  PathIntegrate Python package for pathway-based multi-omics data integration
  ☆18Updated last year
• rformassspectrometry / book
  R for Mass Spectrometry documentation
  ☆14Updated last month
• computational-chemical-biology / ChemWalker
  ☆11Updated last year
• mohimanilab / MetaMiner
  a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs
  ☆12Updated 4 years ago
• dgrapov / CTSgetR
  R interface to Chemical Translation Service (CTS)
  ☆17Updated last year
• cwieder / py-ssPA
  Single sample pathway analysis tools for omics data
  ☆13Updated last year
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆22Updated 4 years ago
• yufree / pmd
  Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
  ☆11Updated 7 months ago
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆24Updated 6 months ago
• saezlab / MetaProViz
  R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
  ☆16Updated 2 weeks ago
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 5 years ago
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆26Updated last week
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆17Updated 2 weeks ago
• fermo-metabolomics / FERMO
  Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.
  ☆33Updated last month
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆28Updated 2 years ago
• xia-lab / ExpressAnalystR
  R functions underlying ExpressAnalyst
  ☆12Updated this week
• ZhuMSLab / DecoMetDIA
  ☆12Updated 3 years ago
• GCA-VH-lab / uorf4u
  uorf4u is a bioinformatics tool for conserved upstream ORF annotation.
  ☆13Updated 3 months ago
• eMetaboHUB / MS-CleanR
  ☆26Updated 2 years ago
• madeleineernst / pyMolNetEnhancer
  ☆20Updated 2 years ago
• Philipbear / BUDDY_Metabolomics
  Molecular formula discovery via bottom-up MS/MS interrogation
  ☆14Updated last year
• erhard-lab / grandR
  R package for nucleotide conversion sequencing data analysis
  ☆16Updated 10 months ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆28Updated 11 months ago
• IxI-97 / BiomiX
  R tool to analyse and integrate multiple -omics data
  ☆15Updated 6 months ago
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆30Updated 2 years ago