Scripts for WGCNA network analysis and correlation with microbial taxonomy traits
☆20Feb 14, 2021Updated 5 years ago
Alternatives and similar repositories for Yu2021NaturePlants
Users that are interested in Yu2021NaturePlants are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A step-by-step tutorial for Weighted correlation network analysis (WGCNA)☆76Apr 28, 2022Updated 4 years ago
- ☆13Nov 13, 2023Updated 2 years ago
- 3’ Tag RNA-seq pipeline (Work in progress)☆10Mar 14, 2021Updated 5 years ago
- lncRNA-screen☆25Apr 19, 2017Updated 9 years ago
- Proteome Generator☆10Apr 18, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Download NCBI assembly genomes with ftp. rsync, ascp☆12Aug 2, 2022Updated 4 years ago
- iTAK☆50Apr 8, 2026Updated 4 months ago
- Repository for the Data challenge about Software and Statistical Methods for Population Genetics (SSMPG 2017)☆14Sep 19, 2017Updated 8 years ago
- ISCB DC Area Regional Student Group - Summer 2016 Workshop☆48Jul 1, 2016Updated 10 years ago
- ☆38Feb 5, 2022Updated 4 years ago
- ☆16Jul 14, 2023Updated 3 years ago
- ☆21Apr 1, 2025Updated last year
- A versatile framework for single-cell transcriptomic data analysis in plants.☆24Mar 11, 2024Updated 2 years ago
- MGnify API toolkit☆18Jan 31, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Phylogeny Enhanded Prediction of PAN-genome☆44Jul 17, 2020Updated 6 years ago
- Model training for ISwine☆15Jun 9, 2020Updated 6 years ago
- CRT outreach program to assist life scientists in learning basic data science skills.☆29Feb 11, 2021Updated 5 years ago
- Miscellaneous R script to wrangle data and generate visualizations☆17Aug 14, 2024Updated 2 years ago
- CWGCNA is an R package to perform causal inference from the WGCNA framework.☆20Oct 26, 2024Updated last year
- ☆20Dec 7, 2020Updated 5 years ago
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆19May 16, 2025Updated last year
- ☆12Jan 14, 2023Updated 3 years ago
- ☆14Jan 2, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- TDNAscan: A Software to Identify Complete and Truncated T-DNA insertions☆23May 6, 2026Updated 4 months ago
- ☆23Aug 22, 2019Updated 7 years ago
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆39Jul 12, 2022Updated 4 years ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆14Jan 14, 2018Updated 8 years ago
- A tutorial for pathway visualization using tidyverse, igraph, and ggraph☆61Oct 26, 2024Updated last year
- ☆18Mar 17, 2022Updated 4 years ago
- half-day introduction to the R language☆22Mar 25, 2018Updated 8 years ago
- Multilocus sequence typing by blast using the schemes from PubMLST☆30Jun 23, 2022Updated 4 years ago
- Calibrated clustering via knockoffs for single-cell genomics☆11Feb 13, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Differential coexpression analysis☆17Aug 9, 2023Updated 3 years ago
- bioinformatics for peter☆12Jun 14, 2026Updated 2 months ago
- an R package for the validation of community detection, it studies the robustness of a community detection algorithm and compares two alg…☆21Jul 3, 2026Updated 2 months ago
- ☆22Jan 28, 2021Updated 5 years ago
- ☆10Jun 13, 2020Updated 6 years ago
- HIBLUP is an Integration of Statistical Methods Under BLUP Framework for Genomic Selection and Prediction☆30Oct 15, 2021Updated 4 years ago
- ☆12Apr 5, 2022Updated 4 years ago