GeneFeng / CircViewLinks
Sample-specific CircRNA Viewer
☆11Updated 6 years ago
Alternatives and similar repositories for CircView
Users that are interested in CircView are comparing it to the libraries listed below
Sorting:
- CircSplice☆12Updated 6 years ago
- ☆15Updated 2 years ago
- documentation for trackViewer☆29Updated 6 years ago
- HOT regions paper☆11Updated 6 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆19Updated 4 months ago
- Snakemake pipeline for running MAJIQ☆23Updated last year
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆29Updated 4 months ago
- An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs☆10Updated 6 years ago
- ☆31Updated 4 years ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆33Updated 3 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- A detailed guide to analise and integrate small-RNASeq and RNASeq samples using miARma-Seq☆11Updated 5 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 3 weeks ago
- ☆9Updated 5 years ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Updated 4 years ago
- Demultiplexes a fastq.☆45Updated 4 years ago
- ☆48Updated 3 years ago
- An R interface to the MEME Suite☆52Updated last month
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 8 years ago
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆16Updated 3 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 6 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- Links to all data science, genomics, and other notes☆51Updated last month
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Updated 3 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Updated last month
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆28Updated 10 years ago
- Epimap processing and analysis code repository☆33Updated 2 years ago