kr-colab / locatorLinks
deep learning prediction of geographic location from individual genome sequences
☆52Updated 11 months ago
Alternatives and similar repositories for locator
Users that are interested in locator are comparing it to the libraries listed below
Sorting:
- Methods for examining PCA locally along the genome.☆86Updated last year
- A statistical framework for ploidy estimation using NGS short-read data☆62Updated 7 years ago
- method for modeling continuous and discrete population genetic structure☆38Updated last year
- microhaplotype visualizer and analyzer☆20Updated 4 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 5 months ago
- Estimating Effective Migration Surfaces☆109Updated 2 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆36Updated 2 years ago
- Population genetic simulations in R☆61Updated 2 weeks ago
- A bioinformatics package for creating, filtering, and manipulating supermatrices and phylogenetic datasets using GenBank and/or local seq…☆44Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆68Updated 2 months ago
- Toolkit for Population Genetic Statistics from Pool-Sequenced Samples, e.g., in Evolve and Resequence experiments☆48Updated 2 months ago
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆43Updated last month
- Pipeline to take VCF through to Selection Analysis.☆58Updated 3 years ago
- genotype dimensionality reduction with a VAE☆48Updated 9 months ago
- A framework for simulation-based inference in evolutionary biology☆28Updated last week
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- ☆30Updated 3 years ago
- Shiny apps for teaching Population Genetics☆66Updated 2 years ago
- Genome wide orthology inference and dNdS estimation☆96Updated 3 months ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- Interim data for the Darwin Tree of Life Project☆33Updated 5 years ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- ☆45Updated 9 months ago
- Implementation of the multiple sequential markovian coalescent☆89Updated 4 months ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- ☆65Updated 3 years ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆24Updated 2 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆17Updated 3 years ago