deep learning prediction of geographic location from individual genome sequences
☆54Jan 20, 2025Updated last year
Alternatives and similar repositories for locator
Users that are interested in locator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- genotype dimensionality reduction with a VAE☆50Mar 11, 2025Updated last year
- Tools for dealing with tree sequences coming to and from SLiM.☆28Updated this week
- Software for detecting introgression using supervised machine learning☆22Nov 21, 2022Updated 3 years ago
- Regression with summary statistics (RSS) package for R.☆10Oct 29, 2020Updated 6 years ago
- defiNETti is a program for performing Bayesian inference on exchangeable (or permutation-invariant) data via deep learning. In particula…☆20Apr 10, 2018Updated 8 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- a short graduate population biology course☆13Feb 22, 2023Updated 3 years ago
- neural network for estimating demographic maps from SNPs☆13Oct 13, 2026Updated 2 weeks ago
- Recombination Landscape Estimation using Recurrent Neural Networks☆74Mar 27, 2026Updated 7 months ago
- feature-based deep learning for the identification of selective sweeps☆59Mar 31, 2026Updated 7 months ago
- ☆13Aug 18, 2023Updated 3 years ago
- An R function to compute Concordance Factors from SNP datasets☆16Dec 4, 2025Updated 10 months ago
- ☆33Jan 14, 2026Updated 9 months ago
- A library of standard population genetic models☆145Updated this week
- Work for the tree sequence inference paper.☆24Oct 19, 2020Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆50Jun 26, 2026Updated 4 months ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆17Feb 19, 2022Updated 4 years ago
- [mu]tation [s]pectrum [h]istory [i]nference☆27Aug 26, 2026Updated 2 months ago
- ☆20Oct 2, 2024Updated 2 years ago
- software for the MAPS method☆25Mar 20, 2019Updated 7 years ago
- Estimating evolutionary coevality☆11Jul 16, 2026Updated 3 months ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 8 years ago
- Analysis of inference methods on standard population models☆25Dec 3, 2021Updated 4 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Jul 4, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆31Sep 27, 2019Updated 7 years ago
- SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexib…☆235Oct 25, 2026Updated last week
- Methods for examining PCA locally along the genome.☆91Aug 13, 2024Updated 2 years ago
- A method to detect polygenic adaptation in an admixture graph☆12Feb 22, 2018Updated 8 years ago
- Forward-time simulation in Python using fwdpp☆34Oct 25, 2026Updated last week
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆45Oct 30, 2025Updated last year
- ☆30Oct 14, 2022Updated 4 years ago
- ARG-Needle library for representing and analyzing ancestral recombination graphs (ARGs)☆10Nov 21, 2025Updated 11 months ago
- An R interface for the ADMIXTOOLS software☆39Oct 7, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- discoal is a coalescent simulation program capable of simulating models with recombination, selective sweeps, and demographic changes inc…☆50May 26, 2026Updated 5 months ago
- A Python package for exploring and analysing genetic variation data☆317Oct 1, 2026Updated last month
- ☆17May 30, 2024Updated 2 years ago
- Simulate ARGs and genomic sequence data using population genetic models☆219Updated this week
- GPU accelerated population genetics statistics package☆34Updated this week
- The Soft/Hard Inference through Classification tool for detecting hard and soft selective sweeps☆14Feb 2, 2021Updated 5 years ago
- Estimation of per-individual inbreeding coefficients under a probabilistic framework☆22Aug 8, 2023Updated 3 years ago