esrud / GONELinks
GONE: Scripts, programs and an example data set
☆47Updated 4 months ago
Alternatives and similar repositories for GONE
Users that are interested in GONE are comparing it to the libraries listed below
Sorting:
- Graph-aware Retrieval of Selective Sweeps☆22Updated last year
- Infer demographic history with the Moran model☆49Updated 5 months ago
- Quantifying Introgression via Branch Lengths☆55Updated 3 years ago
- loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genom…☆25Updated 3 weeks ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated 2 years ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- SambaR: Snp datA Management and Basic Analyses in R☆32Updated last month
- ☆53Updated 5 months ago
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆34Updated 4 years ago
- Topology weighting by iterative sampling of sub-trees☆82Updated 10 months ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆39Updated last year
- Hybridization detection using phylogenetic invariants☆51Updated last year
- Presentations from the course☆38Updated 2 years ago
- Topology weighting from unphased genotypes of any ploidy☆17Updated 3 months ago
- Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV☆16Updated 10 months ago
- Simple tool for capturing alignment regions with sufficient quality for genotyping.☆21Updated 4 years ago
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- Tools and Utilities for msmc and msmc2☆49Updated 3 months ago
- ☆42Updated 2 years ago
- Biodiversity Genomics Academy 2023: Understanding k-mers and ploidy using Smudgeplot☆11Updated 2 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Tutorial about R package PopGenome☆44Updated 6 years ago
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆21Updated last year
- predicting DFE and alpha from polymorphism data☆27Updated 7 years ago
- Likelihood-based Selective Sweep Detection☆40Updated 2 years ago
- ☆24Updated 8 years ago
- Tutorial on using popular tools for learning about population history☆52Updated 7 years ago
- Methods for examining PCA locally along the genome.☆86Updated last year