Alternatives and similar repositories for Cancer_Study

Users that are interested in Cancer_Study are comparing it to the libraries listed below

• jokergoo / ComplexHeatmap_v2_paper_code
  ☆20Updated 2 years ago
• xjsun1221 / RSEM_with_limma_edgeR_Deseq2
  ☆37Updated 4 years ago
• ysuzukilab / Cibersortx
  Repository for Cibersortx
  ☆58Updated 4 years ago
• songw01 / MEGENA
  Multiscale embedded gene co-expression network analysis
  ☆51Updated last year
• wuaipinglab / ImmuCC
  Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.
  ☆25Updated 3 years ago
• noriakis / CBNplot
  Bayesian network plot for the enrichment analysis results
  ☆64Updated 7 months ago
• ajwilk / 2020_Wilk_COVID
  Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…
  ☆49Updated 3 years ago
• priyanka8993 / EMT_score_calculation
  ☆20Updated 3 years ago
• sajuukLyu / Protocols-4pub
  Multi-omics analysis protocols by Lyu.
  ☆51Updated last year
• ShixiangWang / install_GISTIC
  Install GISTIC2 by one line code; GISTIC2 docker image
  ☆41Updated 2 years ago
• liulab-dfci / RIMA_pipeline
  ☆79Updated last year
• BioinformaticsFMRP / PanCanStem_Web
  ☆30Updated 3 years ago
• YuLab-SMU / tigeR
  🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
  ☆33Updated 10 months ago
• zomithex / CIBERSORT
  ☆25Updated 9 years ago
• Moonerss / CIBERSORT
  ☆33Updated 9 months ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆34Updated 4 years ago
• cssmillie / ulcerative_colitis
  ☆61Updated 4 years ago
• KPLab / SCS_CAF
  ☆31Updated 5 years ago
• jasonHKU0907 / proteome-phenome-atlas
  ☆51Updated 2 months ago
• zhengtaoxiao / Single-Cell-Metabolic-Landscape
  Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data
  ☆22Updated 3 years ago
• reimandlab / ActivePathways
  Integrative pathway enrichment analysis of multivariate omics data
  ☆109Updated 9 months ago
• Gibbsdavidl / Immune-Subtype-Clustering
  This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".
  ☆18Updated 5 years ago
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆15Updated 9 months ago
• jcao89757 / SCINA
  SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples
  ☆69Updated 3 years ago
• FredHutch / Galeano-Nino-Bullman-Intratumoral-Microbiota_2022
  Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022
  ☆37Updated last year
• benben-miao / TOmicsVis
  Transcriptomics Visualization R package.
  ☆72Updated last month
• al-mcintyre / merip_reanalysis_scripts
  Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq
  ☆51Updated 5 years ago
• jmzeng1314 / humanid
  my first R package just for testing
  ☆42Updated 6 years ago
• broadinstitute / Celligner_ms
  Code related to the Celligner manuscript
  ☆46Updated 4 years ago
• gatelabNW / csf_aging
  Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment
  ☆27Updated last year