癌症相关学习内容
☆50Aug 9, 2019Updated 6 years ago
Alternatives and similar repositories for Cancer_Study
Users that are interested in Cancer_Study are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jan 21, 2023Updated 3 years ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- Easily Process a Batch of Cox Models☆23Jul 26, 2025Updated 7 months ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆28Jan 9, 2021Updated 5 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆21Oct 12, 2022Updated 3 years ago
- Scripts used for the ACT paper☆12May 6, 2021Updated 4 years ago
- Python function for TMB snake plots☆16Feb 12, 2026Updated last month
- Workflow for Sequenza, cellularity and ploidy☆27Aug 19, 2025Updated 7 months ago
- The ProteoCancer Analysis Suite (PCAS) utilizes the CPTAC database to integrate proteomics, phosphoproteomics, and transcriptomics for ca…☆21Jun 18, 2025Updated 9 months ago
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- ☆13Jun 7, 2024Updated last year
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 4 years ago
- 自己项目整理的目录文件,方便查找,持续更新中☆20Jul 27, 2019Updated 6 years ago
- ☆37Jul 8, 2020Updated 5 years ago
- Using traditional machine learning and deep learning methods to predict stuff from TCGA pathology slides.☆18Sep 24, 2018Updated 7 years ago
- SignalingProfiler is a pipeline that builds signaling networks to cellular phenotypes from multiomics data.☆15Oct 17, 2025Updated 5 months ago
- ☆37Feb 16, 2026Updated last month
- Rheumatoid Arthritis project. single cell RNA sequencing data.☆15May 31, 2021Updated 4 years ago
- ☆24Jun 27, 2017Updated 8 years ago
- R package containing useful functions for mutational signature analysis☆86Mar 16, 2026Updated last week
- ☆105Mar 23, 2020Updated 6 years ago
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆38Nov 14, 2021Updated 4 years ago
- ☆32Dec 6, 2017Updated 8 years ago
- cancereffectsizeR: An R package for calculation of somatic mutation rates and quantification of selection in cancer☆20Jan 6, 2026Updated 2 months ago
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆17Nov 25, 2024Updated last year
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Apr 16, 2021Updated 4 years ago
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- R package for Bioconductor submission☆39Dec 8, 2022Updated 3 years ago
- My Self-Study Room: keep tidy and lightweight☆30Apr 25, 2024Updated last year
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Sep 16, 2021Updated 4 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Aug 6, 2019Updated 6 years ago
- cnv-seq with custom bugfix☆10Mar 23, 2013Updated 13 years ago
- ☆19Feb 20, 2018Updated 8 years ago
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆27Mar 7, 2020Updated 6 years ago
- ☆18Aug 22, 2021Updated 4 years ago
- v2.x of the microassembly based somatic variant caller☆23Jul 16, 2025Updated 8 months ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆25Jan 28, 2026Updated last month
- Exome/Capture/RNASeq Pipeline Implementation using snakemake☆19Oct 18, 2019Updated 6 years ago
- Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.☆115Sep 2, 2024Updated last year