karissawhiting / cbioportalRLinks
R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases
☆22Updated 6 months ago
Alternatives and similar repositories for cbioportalR
Users that are interested in cbioportalR are comparing it to the libraries listed below
Sorting:
- Foundation of vector-like and list-like containers in Bioconductor☆17Updated last month
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 4 years ago
- Gene-level general linear mixed model☆21Updated 4 months ago
- BioC2020: Where Software and Biology Connect☆12Updated 2 years ago
- Core utilities for single-cell RNA-seq☆12Updated last month
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆20Updated 2 months ago
- Take command of your set enrichment analyses.☆21Updated this week
- the manifesto, workshops and tutorials of the tidy transcriptomics☆13Updated last month
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- R interface to megadepth: BigWig and BAM related utilities☆12Updated 5 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated last month
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆31Updated 3 years ago
- An R package to plot interactive three-way differential expression analysis☆37Updated last year
- ☆10Updated 2 years ago
- R package for benchmarking single cell analysis methods☆31Updated last year
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆10Updated last month
- Package to wrangle and visualize genomic data in R☆26Updated 7 months ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆10Updated last year
- NGS workflow templates and sample data☆9Updated last week
- 1000 Genomes Project Metadata R Package☆20Updated 2 years ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated last year
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- R package for detecting differential distributions using a statistical test based on the wasserstein distance☆26Updated 2 years ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- ☆13Updated 2 years ago
- BioCarta pathway images☆11Updated last year
- ☆20Updated last month
- Toolbox package for organizing and working with TCGA data☆27Updated last month