Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution
☆14May 4, 2022Updated 3 years ago
Alternatives and similar repositories for Immunoediting
Users that are interested in Immunoediting are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jan 21, 2023Updated 3 years ago
- ☆12Mar 5, 2024Updated 2 years ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- TLimmuno2: predicting MHC class II antigen immunogenicity through transfer learning☆12Jun 19, 2023Updated 2 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- BulkSignalR☆27Mar 30, 2026Updated 2 weeks ago
- ☆15Nov 13, 2023Updated 2 years ago
- Multimodality Fusion Subtyping (Nature Communications)☆32Apr 21, 2025Updated 11 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Sep 16, 2021Updated 4 years ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆26Jan 28, 2026Updated 2 months ago
- GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…☆21Aug 22, 2025Updated 7 months ago
- bioinformatics R test code☆14Mar 29, 2026Updated 2 weeks ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆23Feb 17, 2023Updated 3 years ago
- Source code and data for "Pan-cancer analysis of bi-allelic alterations in homologous recombination (HR) DNA repair genes" ; See manuscri…☆13May 26, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆15Dec 1, 2025Updated 4 months ago
- 单细胞转录组实战☆13Jul 9, 2019Updated 6 years ago
- Slides for my RLadies NYC Presentation☆11Feb 27, 2020Updated 6 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 4 years ago
- ESTIMATE tumor infiltration, the tidy way☆18Aug 22, 2023Updated 2 years ago
- ☆58Aug 8, 2024Updated last year
- ChEMBL Database used to create Lipinski Descriptors (ADME Pharmokinetic Profile) to use in a Random Forest Regression Model☆15Nov 8, 2020Updated 5 years ago
- Scripts from the GBM cellular states paper☆21Feb 24, 2021Updated 5 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Jan 28, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Predictor of TCR-epitope interactions☆34Sep 9, 2025Updated 7 months ago
- Methods and analysis for Garcia-Nieto, et al. Somatic mutations☆17Jan 5, 2020Updated 6 years ago
- A unified and modular interface to homology modelling software☆12Sep 27, 2023Updated 2 years ago
- ☆32Dec 6, 2017Updated 8 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆54Jan 21, 2026Updated 2 months ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Mar 16, 2025Updated last year
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆32Feb 26, 2020Updated 6 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Feb 17, 2021Updated 5 years ago
- ☆16Nov 2, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Curated list of TCGA resources☆59Nov 10, 2017Updated 8 years ago
- ☆11Apr 25, 2024Updated last year
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Apr 16, 2021Updated 5 years ago
- ☆53Dec 3, 2023Updated 2 years ago
- ☆13Oct 7, 2019Updated 6 years ago
- PRedictor of IMmunogenic Epitopes☆30Sep 24, 2025Updated 6 months ago
- Easily Process a Batch of Cox Models☆23Jul 26, 2025Updated 8 months ago