antanaviciute-agne / singlecellcd8ibd

Related projects ⓘ

Alternatives and complementary repositories for singlecellcd8ibd

• lifei176 / Single-cell-atlas-of-sex-differences-and-androgen-effects
  ☆16Updated 8 months ago
• jalon9358 / LianLab_CRCLM
  ☆11Updated last year
• ChanLab-UTSW / BreastCancer_Integrated
  ☆18Updated 6 months ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆27Updated last year
• PaulingLiu / metaICB
  ☆22Updated last year
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆32Updated 4 years ago
• Lan-lab / sc-GC
  ☆28Updated 2 years ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆24Updated 2 years ago
• SiyuanHuang1 / cpplot
  Visualize the results of cell-cell communication analysis
  ☆19Updated last year
• perou-lab / MultiK
  MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…
  ☆21Updated last year
• marcalva / hcc_sc_2022
  HCC single cell analysis for Alvarez, Benhammou et al.
  ☆16Updated 2 years ago
• Chuxj / CRC-atlas
  ☆18Updated 5 months ago
• Single-Cell-Genomics-Group-CNAG-CRG / TonsilAtlas
  Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)
  ☆24Updated last month
• SaskiaFreytag / spatial_brain_cancer
  ☆12Updated last year
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆35Updated last year
• meichendong / SCDC
  SCDC
  ☆42Updated last year
• Xiaxy-XuLab / PanCAF
  ☆33Updated 2 years ago
• smorabit / hdWGCNA_paper
  Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
  ☆13Updated last year
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆46Updated last year
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆40Updated 3 years ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆37Updated last year
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆26Updated 3 years ago
• liziyie / Onco-fetal-CAF-in-HCC
  ☆17Updated last year
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆46Updated this week
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆31Updated 3 years ago
• califano-lab / single-cell-pipeline
  ☆41Updated 4 years ago
• pancancer / myeloid
  Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…
  ☆10Updated last year
• ZJUFanLab / CellTalkDB
  A manually curated database of literature-supported ligand-receptor interactions in human and mouse
  ☆25Updated 4 months ago
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆30Updated 4 months ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆44Updated 3 weeks ago