Comprehensive genome-wide visualization of absolute copy number and copy neutral variations
☆29Apr 10, 2019Updated 7 years ago
Alternatives and similar repositories for aCNViewer
Users that are interested in aCNViewer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Optimizing Cancer Mutation Signatures Jointly with Sampling Likelihood☆10Aug 22, 2022Updated 3 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Jan 17, 2020Updated 6 years ago
- CNV analysis workflow code for the manuscript☆13Jun 22, 2020Updated 5 years ago
- Concordance and contamination estimator for tumor–normal pairs☆60Oct 22, 2024Updated last year
- cDriver R package for finding candidate driver genes in cancers☆18Jan 18, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data☆21Aug 19, 2020Updated 5 years ago
- Code accompanying "The evolutionary history of 2,658 cancers", Nature 578, 122–128 (2020)☆17Jan 15, 2020Updated 6 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- Inferring selection in cancer sequencing data using ABC and population based simulations☆12Jan 31, 2021Updated 5 years ago
- ☆14Mar 28, 2025Updated last year
- The curatedOvarianData package provides data for gene expression analysis in patients with ovarian cancer☆12Apr 29, 2026Updated last week
- Implementation of FACETS for Terra☆12Jan 20, 2023Updated 3 years ago
- Somatic copy number analysis using WGS paired end wholegenome sequencing☆72Nov 20, 2020Updated 5 years ago
- Easy Copy Number !☆21Aug 27, 2025Updated 8 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Cancer Predisposition Sequencing Reporter (CPSR)☆64Updated this week
- ☆22Feb 5, 2025Updated last year
- ☆12Apr 26, 2020Updated 6 years ago
- Code used to generate the results in "Somatic chronology of treatment-resistant prostate cancer via deep whole-genome ctDNA sequencing"☆16Mar 11, 2024Updated 2 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆44Aug 24, 2022Updated 3 years ago
- SV clustering☆31Jul 5, 2021Updated 4 years ago
- A framework to infer mutational signatures in cancer over time☆58Jul 9, 2019Updated 6 years ago
- Nextflow pipeline for Mutect2 somatic variant calling best practices☆23Jun 14, 2024Updated last year
- Mutational Signature Comprehensive Analysis Toolkit☆16Apr 11, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package to organise and standardise your genomic variant calls obtained with different callers.☆11Jul 15, 2019Updated 6 years ago
- Lifterover copy number segments in whole☆24Feb 6, 2024Updated 2 years ago
- Clonal structure identification through penalizing pairwise differences☆11Nov 25, 2025Updated 5 months ago
- Battenberg R package for subclonal copynumber estimation