zhengkangjie / ESM-AALinks
☆76Updated 8 months ago
Alternatives and similar repositories for ESM-AA
Users that are interested in ESM-AA are comparing it to the libraries listed below
Sorting:
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆120Updated 8 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆45Updated 10 months ago
- Official repository of ReactZyme☆36Updated last year
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated 2 years ago
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆37Updated last year
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated 2 years ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆59Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆82Updated last year
- Code for humanization of antibody and nanobody☆58Updated last month
- ☆94Updated last year
- Reaction-Conditioned Virtual Screening of Enzymes☆39Updated 4 months ago
- Official repository of EnzymeFlow☆94Updated 10 months ago
- Structure-conditioned masked language modeling for protein sequence design☆69Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆122Updated 4 months ago
- ☆107Updated 2 years ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆97Updated 2 years ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆69Updated last year
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆27Updated 2 years ago
- ☆65Updated 2 years ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆94Updated 9 months ago
- ☆121Updated 4 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆86Updated 4 months ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆95Updated 6 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆92Updated 5 months ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆41Updated last year
- ☆32Updated 7 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆104Updated last week
- A standardized protein design benchmark for motif-scaffolding problems☆68Updated 3 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆78Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆64Updated 5 months ago