Furman-Lab / PatchMAN
☆25Updated 6 months ago
Alternatives and similar repositories for PatchMAN:
Users that are interested in PatchMAN are comparing it to the libraries listed below
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆25Updated last year
- PyDock Tutorial☆30Updated 6 years ago
- Some scripts that I keep using over and over.☆18Updated 2 months ago
- Making Protein folding accessible to all!☆21Updated last year
- ☆26Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆26Updated 11 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆43Updated 2 weeks ago
- An accurate and efficient protein sequence design approach☆23Updated last year
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆15Updated last year
- bakerlab pymol scripts☆21Updated 5 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- ☆19Updated 2 years ago
- ☆31Updated last year
- a universal framework for computational protein design☆35Updated last year
- Material to run the HADDOCK antibody-antigen modelling protocol☆22Updated last year
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆22Updated 5 years ago
- scripts to find PBD structures for cancer driver proteins☆31Updated last week
- Repo contains source code of the SurfaceID paper☆19Updated 11 months ago
- ☆38Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆34Updated 2 years ago
- Ultra-fast in-silico structure mutation☆32Updated 2 years ago
- ☆19Updated last year
- ☆25Updated 3 weeks ago
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆16Updated 3 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆23Updated 3 weeks ago
- ☆36Updated last year
- Extension of ThermoMPNN for double mutant predictions☆24Updated last month
- Explicit crosslinks in AlphaFold 3☆18Updated 2 weeks ago
- An antibody-specific language model focusing on NGL prediction☆25Updated 6 months ago