Jfeldman34 / AF3ComplexLinks
☆53Updated 7 months ago
Alternatives and similar repositories for AF3Complex
Users that are interested in AF3Complex are comparing it to the libraries listed below
Sorting:
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆93Updated last month
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Updated last year
- A command-line interface and Python library for generating AlphaFold3 input files.☆38Updated last month
- ☆94Updated 3 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Official repository for the ProteinDJ protein design pipeline☆87Updated 2 weeks ago
- code for IDR binding paper 2025☆67Updated 11 months ago
- Analysis of alphafold and colabfold results☆34Updated last month
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆119Updated 2 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆78Updated 3 months ago
- ☆91Updated last year
- ☆56Updated 5 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆80Updated 2 months ago
- Extension of ThermoMPNN for double mutant predictions☆53Updated 4 months ago
- Efficient manipulation of protein structures in Python☆61Updated 4 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆108Updated last week
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆50Updated last year
- Predicting high-fitness mutations based on protein inverse folding models☆75Updated 4 months ago
- Small_molecule_binder_design_use_pseudocycles☆23Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆70Updated 7 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆72Updated last year
- ☆61Updated last year
- Learning the language of protein-protein interactions☆131Updated 3 weeks ago
- ☆84Updated 2 months ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆87Updated 4 months ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆101Updated this week
- ☆30Updated 4 months ago
- de novo design of high affinity biological binders☆122Updated this week
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆47Updated 3 months ago