biomap-research / xTrimoPGLMLinks
The first 100B protein language model from biomap
β16Updated 4 months ago
Alternatives and similar repositories for xTrimoPGLM
Users that are interested in xTrimoPGLM are comparing it to the libraries listed below
Sorting:
- π Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance (Journal of Chemical Information and Modβ¦β24Updated 2 months ago
- Code and Pre-Trained Models for "AttnPacker: An end-to-end deep learning method for protein side-chain packing"β85Updated last year
- β28Updated last year
- Code of βMulti-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sitesββ38Updated 5 months ago
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.β66Updated 4 months ago
- Baseline model for PPB-Affinity benchmark dataβ27Updated 2 months ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)β59Updated 5 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocolβ32Updated 2 years ago
- β15Updated 5 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.β62Updated 2 months ago
- Implementation of AlphaFold 3 in PyTorch Lightning + Hydraβ34Updated 10 months ago
- PoseX: A Molecular Docking Benchmarkβ47Updated last month
- Structural Quality Assessment for Biomolecular Structure Prediction Modelsβ38Updated this week
- β77Updated 3 weeks ago
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusionβ58Updated last year
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user exβ¦β43Updated 8 months ago
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.β47Updated 2 weeks ago
- β25Updated 10 months ago
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinementβ47Updated last year
- β36Updated 2 months ago
- A benchmark for 3D biomolecular structure prediction modelsβ63Updated 3 months ago
- β24Updated 10 months ago
- Benchmarking code accompanying the release of `bioemu`β39Updated last month
- Code for the paper "Learning to engineer protein flexibility".β19Updated last month
- Generative diverse protein backbones by protein language modelβ32Updated 8 months ago
- Public Release of ProGen3 family of Modelsβ79Updated 3 weeks ago
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"β24Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluationβ63Updated 2 months ago
- MiniFold: Simple, Fast and Accurate Protein Structure Predictionβ32Updated last month
- A standardized protein design benchmark for motif-scaffolding problemsβ65Updated 2 weeks ago