Alternatives and similar repositories for ProteinMechanicsDiffusionDesign

Users that are interested in ProteinMechanicsDiffusionDesign are comparing it to the libraries listed below

• KoubaPetr / Flexpert
  Code for the paper "Learning to engineer protein flexibility".
  ☆22Updated 2 weeks ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆34Updated 3 months ago
• smiles724 / PeptideDesign
  ☆35Updated 2 months ago
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆53Updated last week
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆35Updated last year
• tyang816 / SES-Adapter
  🎈 Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance (Journal of Chemical Information and Mod…
  ☆25Updated 8 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆33Updated 2 years ago
• KULL-Centre / _2024_cagiada_stability
  ☆74Updated 10 months ago
• Graylab / DFMDock
  DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.
  ☆53Updated 6 months ago
• ChenPy00 / PPB-Affinity
  Baseline model for PPB-Affinity benchmark data
  ☆34Updated 8 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆47Updated 3 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆61Updated 8 months ago
• kiharalab / Distance-AF
  Public version for Distance-AF
  ☆30Updated 5 months ago
• Immortals-33 / Scaffold-Lab
  A comprehensive benchmark on the performances of multiple protein backbone generative models.
  ☆65Updated last week
• wallnerlab / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆54Updated 5 months ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆59Updated last month
• ohuelab / ColabDesign-cyclic-binder
  ☆37Updated 2 years ago
• mgreenig / IgCraft
  Versatile human antibody sequence design
  ☆21Updated 8 months ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆80Updated 11 months ago
• bzho3923 / CPDiffusion
  ☆25Updated last year
• BioinfoMachineLearning / GCPNet
  A geometry-complete SE(3)-equivariant perceptron network (GCPNet) for 3D graphs. (Bioinformatics)
  ☆52Updated 9 months ago
• skalyaanamoorthy / PSLMs
  ☆21Updated last year
• CDDLeiden / PCMol
  Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.
  ☆73Updated 10 months ago
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆36Updated 2 years ago
• LDeng0205 / confidence-bootstrapping
  Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.
  ☆27Updated last year
• ProteinDesignLab / caliby
  Potts model-based protein sequence design
  ☆78Updated 3 weeks ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆69Updated 8 months ago
• feiglab / idpgan
  ☆51Updated last year
• bene837 / af2seq
  ☆47Updated last year
• bwicky / oligomer_hallucination
  ☆37Updated 2 years ago