Alternatives and similar repositories for PEFT-SP:

Users that are interested in PEFT-SP are comparing it to the libraries listed below

• WeiLab-Biology / DeepProSite
  ☆31Updated last year
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆54Updated 2 months ago
• ruofanjin / AttABseq
  ☆11Updated 11 months ago
• wangxr0526 / EasIFA
  Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”
  ☆30Updated 3 weeks ago
• RSchmirler / data-repo_plm-finetune-eval
  Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"
  ☆36Updated 7 months ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• duolinwang / S-PLM
  S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure
  ☆60Updated 2 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆39Updated 4 months ago
• ddd9898 / DeepNano
  Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.
  ☆32Updated 3 months ago
• wukevin / proteinclip
  Contrastive learning harmonizing protein language models and natural language models
  ☆30Updated 9 months ago
• tyang816 / VenusREM
  🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion.
  ☆44Updated last week
• fdu-wangfeilab / AntiBinder
  ☆11Updated 2 weeks ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆70Updated 2 months ago
• Gonglab-THU / GeoStab
  ☆30Updated 5 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆57Updated last year
• liuyf020419 / SCUBA-D
  ☆58Updated 11 months ago
• YAndrewL / CLAPE
  contrastive learning and pre-trained encoder for protein-ligand binding sites prediction
  ☆27Updated 3 months ago
• brineylab / BALM-paper
  ☆17Updated 3 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆44Updated 3 months ago
• danny305 / StabilityOracle
  ☆24Updated 9 months ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆35Updated 2 years ago
• EDAPINENUT / GeoAB
  This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)
  ☆37Updated 9 months ago
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆50Updated 8 months ago
• BEAM-Labs / BALM
  Inference code for Bio-Inspired Antibody Language Model
  ☆24Updated 7 months ago
• CarbonMatrixLab / immunefold
  Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning
  ☆21Updated 2 weeks ago
• jkwang93 / AMP-Designer
  A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery
  ☆21Updated this week
• ai4protein / ProtSSN
  🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…
  ☆57Updated 2 months ago
• charlesxu90 / helm-gpt
  HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer
  ☆22Updated 9 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆44Updated last year
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆33Updated 6 months ago