Genome-wide de novo genotyping with 2bRAD
☆23May 22, 2025Updated 10 months ago
Alternatives and similar repositories for 2bRAD_denovo
Users that are interested in 2bRAD_denovo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆20Aug 10, 2022Updated 3 years ago
- association analysis of distance matrices using gradient forest approach☆16Oct 7, 2025Updated 5 months ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13May 1, 2019Updated 6 years ago
- This repository contains the code and manual for the R package delimitR.☆17Apr 19, 2022Updated 3 years ago
- Random scripts, mostly for dealing with RADseq data and DNA sequence alignments☆18Oct 2, 2025Updated 5 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆29Mar 5, 2024Updated 2 years ago
- Mutation rate analysis of autosomal loci☆15Jun 25, 2020Updated 5 years ago
- ☆15Jun 2, 2021Updated 4 years ago
- ☆12Nov 23, 2020Updated 5 years ago
- ☆26Aug 25, 2021Updated 4 years ago
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆14Nov 16, 2020Updated 5 years ago
- Hagfish - assess an assembly through creative use of coverage plots☆36Aug 9, 2012Updated 13 years ago
- R package and web app for spatial visualisation of admixture on a projected map☆46Apr 3, 2025Updated 11 months ago
- use paired-end transcriptome reads to scaffold genomes☆11May 30, 2019Updated 6 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Mutual nearest neighbor graphs and data visualization for genomic population networks☆17Feb 6, 2022Updated 4 years ago
- Some bioinformic domestic scripts.☆35Nov 27, 2022Updated 3 years ago
- a bash pipeline for RAD sequencing☆55Jan 27, 2025Updated last year
- A powerful Perl module for simulating the genome digestions by restriction enzymes☆14Sep 10, 2024Updated last year
- Feature Aggregate Depth Utility☆12Aug 20, 2024Updated last year
- Simple and flexible manipulation of genomic data.☆16Apr 16, 2025Updated 11 months ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆22Sep 5, 2025Updated 6 months ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Mar 3, 2025Updated last year
- mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.☆88Jun 14, 2021Updated 4 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Estimating gene family turnover rates by likelihood-based methods☆12Aug 17, 2020Updated 5 years ago
- Tools for generating and decoding error-correcting DNA barcodes☆15Feb 15, 2022Updated 4 years ago
- Our laboratory repository☆11Jan 12, 2021Updated 5 years ago
- ☆21Apr 14, 2019Updated 6 years ago
- A mosaic genome painting tool for plant genomes☆18Mar 4, 2025Updated last year
- A pipeline to identify gene family using mutiple tools and scripts.☆11Aug 22, 2021Updated 4 years ago
- Some of the stuff I am currently using for my Chinese studies☆13Dec 1, 2018Updated 7 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Apr 1, 2021Updated 4 years ago
- Demographic inference from whole genomes☆13Oct 18, 2022Updated 3 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- RabbitMash: an efficient highly optimized implementation of Mash.☆20Oct 28, 2023Updated 2 years ago
- MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers☆22May 8, 2017Updated 8 years ago
- Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clin…☆16Oct 12, 2024Updated last year
- Search for a set of compatible indexes for your sequencing experiment☆11Sep 6, 2019Updated 6 years ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆204Aug 15, 2024Updated last year
- Tools for improving the sensitivity and specificity of genome alignments☆58Mar 12, 2026Updated 2 weeks ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Nov 24, 2020Updated 5 years ago