Alternatives and similar repositories for esm-efficient

Users that are interested in esm-efficient are comparing it to the libraries listed below

• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆103Updated 3 weeks ago
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆90Updated last week
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆79Updated last year
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆117Updated 5 months ago
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆72Updated 6 months ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆65Updated 2 weeks ago
• yoakiyama / MSA_Pairformer
  ☆74Updated last week
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆70Updated 2 months ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆68Updated 3 years ago
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆72Updated last month
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆80Updated last week
• liuyf020419 / SCUBA-D
  ☆61Updated last year
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆110Updated 5 months ago
• RSchmirler / data-repo_plm-finetune-eval
  Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"
  ☆45Updated last year
• RosettaCommons / atomworks
  A generalized computational framework for biomolecular modeling.
  ☆198Updated this week
• hefeda / PGP
  ☆42Updated 3 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆65Updated 9 months ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆43Updated 2 years ago
• Exscientia / abodybuilder3
  ☆65Updated 10 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆51Updated 3 weeks ago
• westlake-repl / SaprotHub
  Making Protein Modeling Accessible to All Biologists
  ☆118Updated this week
• Kuhlman-Lab / evopro
  ☆86Updated last month
• levinthal / Pallatom
  ☆109Updated 2 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆49Updated 9 months ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆58Updated 5 months ago
• chandar-lab / AMPLIFY
  ☆109Updated last month
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆82Updated last year
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆83Updated 2 months ago
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆58Updated 8 months ago
• zhanghaicang / carbonmatrix_public
  ☆115Updated 2 months ago