Calculate the RMSD between two antibody structure (including nanobody and antibody).
☆11May 19, 2023Updated 2 years ago
Alternatives and similar repositories for ab_rmsd
Users that are interested in ab_rmsd are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Scoring methods for predicting the DDG upon protein mutation☆16Feb 20, 2023Updated 3 years ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆104Apr 7, 2023Updated 3 years ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆23Jul 9, 2024Updated last year
- python script that picks suitable targets for siRNA with off-target optimization☆16Oct 23, 2021Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆22Apr 10, 2025Updated last year
- EvolveX, a de novo antibody computational design pipeline.☆23Sep 18, 2025Updated 7 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆37Nov 7, 2024Updated last year
- ☆16Apr 9, 2026Updated last week
- ☆10Feb 18, 2020Updated 6 years ago
- Target prediction☆14May 8, 2020Updated 5 years ago
- diffusion model for protein sequence generation☆50Feb 18, 2023Updated 3 years ago
- ☆42Apr 30, 2024Updated last year
- ☆11May 22, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆16Dec 2, 2025Updated 4 months ago
- A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Su…☆19Mar 1, 2026Updated last month
- Versatile human antibody sequence design☆22Apr 12, 2026Updated last week
- Machine learning-driven antibody design☆63Jul 5, 2023Updated 2 years ago
- ☆13Mar 28, 2025Updated last year
- Polyreactivity Website☆21Jun 26, 2023Updated 2 years ago
- Antibody-Antigen Docking and Affinity Benchmark☆78Nov 17, 2020Updated 5 years ago
- A visualization software for antibody multi sequence alignment☆22Jun 15, 2024Updated last year
- The ProteoCancer Analysis Suite (PCAS) utilizes the CPTAC database to integrate proteomics, phosphoproteomics, and transcriptomics for ca…☆21Jun 18, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆132Mar 10, 2026Updated last month
- Repo of AntiBMPNN project for antibody sequence design.☆34May 28, 2025Updated 10 months ago
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequences…☆19Feb 23, 2026Updated last month
- ☆14Dec 7, 2024Updated last year
- Synthetic Accessibility via Fragment Assembly Generation☆23Apr 9, 2026Updated last week
- ☆60Mar 25, 2024Updated 2 years ago
- Scores for Hydrophobicity and Charges based on SASAs☆41Jun 12, 2025Updated 10 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆37Mar 19, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆134Nov 30, 2025Updated 4 months ago
- ☆13Sep 14, 2021Updated 4 years ago
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆20May 9, 2024Updated last year
- MULTI-evolve: a machine learning-guided end-to-end framework for engineering hyperactive multi-mutant proteins☆59Feb 28, 2026Updated last month
- Therapeutic Nanobody Profiler☆21Nov 11, 2025Updated 5 months ago
- Code for the antibody deep learning paper.☆16Feb 28, 2022Updated 4 years ago
- Visualize atom and non-atom attributions and SMILES strings☆50Updated this week