opain / Inferred-functional-risk-scoringLinks
R script for generating functionally informed genetic risk scores from TWAS
☆11Updated last year
Alternatives and similar repositories for Inferred-functional-risk-scoring
Users that are interested in Inferred-functional-risk-scoring are comparing it to the libraries listed below
Sorting:
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Updated 2 years ago
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆16Updated 3 weeks ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 2 years ago
- Integration of TWAS and Colocalization Analysis☆17Updated 8 months ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- R script that performs gene-set or gene property analysis using TWAS results.☆32Updated 10 months ago
- ☆8Updated 5 months ago
- MR-link-2: pleiotropy robust cis MR☆17Updated 2 months ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆11Updated 2 months ago
- ☆12Updated last year
- This is a pipeline for calculating weights for TWAS☆32Updated 2 years ago
- Workflow for performing cistrome-wide associations studies☆10Updated 2 years ago
- GENI plots to visualise results from genome-wide association studies☆29Updated 9 months ago
- Fine-mapping method only using summary statistics☆19Updated 9 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 2 weeks ago
- ☆17Updated 7 months ago
- ☆20Updated 10 months ago
- Create Regional Association Plots☆12Updated 11 months ago
- ☆19Updated last year
- ☆15Updated 4 years ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- An R package for creating ggplot2 based miami plots.☆17Updated 4 months ago
- ☆16Updated 4 months ago
- R script to make Manhattan-style plot for TWAS☆38Updated 3 years ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆15Updated last year
- Collaborative genetic studies of idiopathic pulmonary fibrosis☆17Updated 5 months ago
- Software to infer latent pleiotropic components from GWAS summary data☆15Updated 5 months ago
- Discovery of genetic variants with shared effect across multiple phenotypes from GWAS summary statistics☆14Updated last year
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 3 years ago