Summary-level Unified Method for Modeling Integrated Transcriptome
☆10Jun 27, 2023Updated 3 years ago
Alternatives and similar repositories for SUMMIT
Users that are interested in SUMMIT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 10 months ago
- Leveraging functional information to improve GWAS summary statistic imputation☆21Aug 10, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 5 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆20Mar 30, 2021Updated 5 years ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- ☆11Mar 16, 2022Updated 4 years ago
- ☆26Jan 8, 2026Updated 5 months ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆38Jun 3, 2025Updated last year
- ☆20Aug 7, 2025Updated 10 months ago
- Cross-population analysis using GWAS summary statistics☆20Jun 25, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A powerful TWAS framework leveraging summary-level reference data☆34Apr 1, 2025Updated last year
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆20Nov 26, 2023Updated 2 years ago
- EXpression PREdiction with Summary Statistics Only☆13Dec 10, 2025Updated 6 months ago
- TCSC (Tissue co-regulation score regression) is a statistical genetics method to identify causal tissues in diseases and complex traits.☆16Oct 3, 2024Updated last year
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago
- ☆18Aug 25, 2025Updated 10 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 4 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Sep 26, 2024Updated last year
- Proteome-Wide Association Study☆51Apr 4, 2021Updated 5 years ago
- ☆15Apr 20, 2021Updated 5 years ago
- hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.☆11Jan 19, 2024Updated 2 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆35Jan 28, 2026Updated 5 months ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆47Mar 16, 2026Updated 3 months ago
- ☆19Sep 20, 2021Updated 4 years ago
- R script to make Manhattan-style plot for TWAS☆42Aug 15, 2021Updated 4 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆29Sep 20, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- lhcMR☆26Mar 24, 2024Updated 2 years ago
- R script for generating functionally informed genetic risk scores from TWAS☆11Jul 20, 2023Updated 2 years ago
- ☆21Nov 15, 2024Updated last year
- ☆21Aug 20, 2024Updated last year
- An R package for adaptive sum of powered score test(ASPU) in genetic association studies.☆12Jun 28, 2021Updated 5 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆55Oct 19, 2025Updated 8 months ago
- corrplot of LDSC genetic correlation results☆58Mar 16, 2022Updated 4 years ago