szcf-weiya / MTWASLinks
R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"
☆16Updated 3 months ago
Alternatives and similar repositories for MTWAS
Users that are interested in MTWAS are comparing it to the libraries listed below
Sorting:
- Integration of TWAS and Colocalization Analysis☆17Updated last year
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- GENI plots to visualise results from genome-wide association studies☆31Updated last year
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆25Updated last month
- Create Regional Association Plots☆13Updated 4 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆31Updated last week
- ☆21Updated last year
- ☆14Updated last year
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆16Updated 7 months ago
- ☆21Updated 5 months ago
- Estimate genetic correlation using predicted expression☆23Updated 7 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- MR-link-2: pleiotropy robust cis MR☆21Updated 5 months ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆16Updated last month
- Workflow for performing cistrome-wide associations studies☆11Updated 3 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 6 months ago
- Tissue-Gene Fine-Mapping☆26Updated 10 months ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Updated 2 years ago
- An accurate and efficient colocalization method accounting for multiple causal signals☆13Updated last year
- GWAS genetics Fine-mapping method☆26Updated last year
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 3 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Updated 6 months ago
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 3 years ago
- ☆11Updated 3 years ago
- Regional association plots☆24Updated last year
- ☆13Updated 3 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆19Updated 4 years ago
- We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more a…☆13Updated 5 months ago