rhhao / csMRLinks
Perform cell-stratified MR analysis through integrating GWAS and QTL data
☆34Updated 3 months ago
Alternatives and similar repositories for csMR
Users that are interested in csMR are comparing it to the libraries listed below
Sorting:
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 8 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆56Updated 4 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆36Updated last month
- ☆32Updated 3 months ago
- An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…☆33Updated 3 years ago
- A powerful TWAS framework leveraging summary-level reference data☆31Updated 6 months ago
- LD Score Regression in R☆49Updated 2 months ago
- Data objects for various sets of instruments☆46Updated 5 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆50Updated 7 months ago
- ☆20Updated last month
- ☆30Updated 4 years ago
- corrplot of LDSC genetic correlation results☆56Updated 3 years ago
- Tissue-Gene Fine-Mapping☆25Updated 7 months ago
- An R package for Mendelian Randomization☆38Updated last year
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆18Updated 4 years ago
- Pair-wise conditional analysis and colocalisation☆40Updated last year
- ☆37Updated 4 years ago
- R package for CAUSE☆56Updated last year
- ☆57Updated 9 months ago
- ☆24Updated 6 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆30Updated last week
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 3 months ago
- ☆41Updated 3 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆20Updated 2 weeks ago
- Collaborative genetic studies of idiopathic pulmonary fibrosis☆18Updated 3 weeks ago
- Meta-analysis of genomewide association scans☆62Updated last year
- Regional association plots☆25Updated last year
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago