rhhao / csMRLinks
Perform cell-stratified MR analysis through integrating GWAS and QTL data
☆35Updated 6 months ago
Alternatives and similar repositories for csMR
Users that are interested in csMR are comparing it to the libraries listed below
Sorting:
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆38Updated 11 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆58Updated 4 years ago
- An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…☆33Updated 3 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆38Updated 4 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Updated last year
- A powerful TWAS framework leveraging summary-level reference data☆32Updated 9 months ago
- ☆40Updated this week
- ☆20Updated 4 months ago
- Data objects for various sets of instruments☆47Updated 5 years ago
- An R package for Mendelian Randomization☆39Updated last year
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆31Updated last week
- ☆41Updated 4 years ago
- ☆30Updated 4 years ago
- ☆44Updated 8 months ago
- Tissue-Gene Fine-Mapping☆26Updated 10 months ago
- ☆57Updated last year
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- LD Score Regression in R☆51Updated 5 months ago
- FLAMES: Accurate gene prioritization in GWAS loci☆57Updated last month
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆38Updated last year
- This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.☆41Updated 4 years ago
- R package for CAUSE☆56Updated 2 years ago
- ☆13Updated 3 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆25Updated last month
- R package that contains plink binaries for windows, mac and linux☆14Updated 6 years ago
- Meta-analysis of genomewide association scans☆63Updated last year
- GWAS summary statistics files QC tool☆42Updated last year
- UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association…☆44Updated 2 months ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆35Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆26Updated 4 years ago