A powerful TWAS framework leveraging summary-level reference data
☆35Apr 1, 2025Updated last year
Alternatives and similar repositories for OTTERS
Users that are interested in OTTERS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 3 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated last year
- ☆15Dec 8, 2023Updated 2 years ago
- EXpression PREdiction with Summary Statistics Only☆14Dec 10, 2025Updated 8 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆23Apr 19, 2026Updated 3 months ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆21Aug 10, 2021Updated 4 years ago
- ☆56Jan 16, 2025Updated last year
- An accurate and efficient colocalization method accounting for multiple causal signals☆14Jun 3, 2024Updated 2 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 11 months ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆39Jun 3, 2025Updated last year
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Hypothesis Prioritisation in multi-trait Colocalization☆58Apr 8, 2024Updated 2 years ago
- Partitioning algorithm developed for LAVA☆17May 17, 2024Updated 2 years ago
- ☆15Apr 20, 2021Updated 5 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆41Feb 8, 2025Updated last year
- ☆13Jun 16, 2026Updated last month
- A fast and robust Bayesian nonparametric method for prediction of complex traits using GWAS summary statistics☆14May 24, 2025Updated last year
- Software implementing the Latent Causal Variable Model☆68Jun 30, 2020Updated 6 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- ☆14Jun 24, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R script to make Manhattan-style plot for TWAS☆43Aug 15, 2021Updated 4 years ago
- ☆11Jan 30, 2025Updated last year
- Estimates partitioned heritability and enrichment for gene sets in complex human traits.☆25Sep 12, 2025Updated 10 months ago
- ☆20Sep 20, 2021Updated 4 years ago
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 5 years ago
- Estimate genetic correlation using predicted expression☆28Mar 8, 2018Updated 8 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆20Mar 30, 2021Updated 5 years ago
- Calling disease-related genes☆17Apr 1, 2026Updated 4 months ago
- MetaXcan software and manuscript☆201Jun 7, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This is a pipeline for calculating weights for TWAS☆35Aug 3, 2022Updated 4 years ago
- An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)☆14Jul 11, 2024Updated 2 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆17Jan 30, 2025Updated last year
- ☆90Jul 28, 2026Updated last week
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- ☆21Aug 20, 2024Updated last year
- lhcMR☆26Mar 24, 2024Updated 2 years ago