jinghuazhao / EWAS-fusionLinks
Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)
☆12Updated 2 years ago
Alternatives and similar repositories for EWAS-fusion
Users that are interested in EWAS-fusion are comparing it to the libraries listed below
Sorting:
- R script for generating functionally informed genetic risk scores from TWAS☆11Updated 2 years ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 2 years ago
- ☆11Updated last month
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- Integration of TWAS and Colocalization Analysis☆17Updated 9 months ago
- ☆16Updated 5 months ago
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆16Updated last month
- ☆8Updated 6 months ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated last month
- Collaborative genetic studies of idiopathic pulmonary fibrosis☆17Updated 6 months ago
- Workflow for performing cistrome-wide associations studies☆10Updated 3 years ago
- ☆12Updated last year
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆17Updated last month
- Create Regional Association Plots☆12Updated last year
- MR-link-2: pleiotropy robust cis MR☆18Updated this week
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆18Updated 4 years ago
- This is a pipeline for calculating weights for TWAS☆32Updated 3 years ago
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- An R package for creating ggplot2 based miami plots.☆17Updated 5 months ago
- R script that performs gene-set or gene property analysis using TWAS results.☆32Updated 10 months ago
- ☆19Updated last year
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆15Updated this week
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆19Updated last month
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 3 years ago
- ☆20Updated 11 months ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆11Updated 3 months ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆12Updated last month
- GENI plots to visualise results from genome-wide association studies☆29Updated 9 months ago