bsml320 / deTSLinks
deTS
☆18Updated 5 years ago
Alternatives and similar repositories for deTS
Users that are interested in deTS are comparing it to the libraries listed below
Sorting:
- ☆79Updated 3 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆75Updated 2 months ago
- ☆48Updated last month
- Gene Set + S2G strategy annotations analyzed for disease architecture☆52Updated 2 years ago
- CELLEX (CELL-type EXpression-specificity)☆43Updated 2 years ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆59Updated 5 months ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆57Updated 6 months ago
- ☆25Updated 2 weeks ago
- ☆35Updated 4 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆38Updated 4 months ago
- Colocalization analysis of genetic association signals☆52Updated last month
- SCAVENGE is a method to optimize the inference of functional and genetic associations to specific cells at single-cell resolution.☆85Updated last year
- Brain-related -omics data☆26Updated 11 months ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 4 years ago
- Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis☆46Updated 4 years ago
- ☆47Updated 6 months ago
- ☆33Updated 6 years ago
- Find causal cell-types underlying complex trait genetics☆88Updated 4 months ago
- Fast, integrative fine mapping with functional data☆59Updated 5 years ago
- ☆33Updated last year
- CELLECT (CELL-type Expression-specific integration for Complex Traits)☆84Updated 11 months ago
- scWGCNA☆61Updated 2 years ago
- A powerful TWAS framework leveraging summary-level reference data☆30Updated 3 months ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago