xinhe-lab / ctwasLinks
causal TWAS (cTWAS)
☆45Updated last month
Alternatives and similar repositories for ctwas
Users that are interested in ctwas are comparing it to the libraries listed below
Sorting:
- ☆48Updated 3 months ago
- QTL Discovery using Annotations☆25Updated 2 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated last year
- Colocalization analysis of genetic association signals☆54Updated 3 months ago
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆41Updated 9 months ago
- ☆23Updated 4 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆49Updated 6 months ago
- Every Gene Ever Annotated in published GWAS☆48Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 5 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated this week
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated 11 months ago
- ☆82Updated last month
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆33Updated 3 months ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated 4 months ago
- ☆20Updated last month
- FLAMES: Accurate gene prioritization in GWAS loci☆43Updated 6 months ago
- ☆21Updated 2 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆40Updated 2 years ago
- Functional genomics and genome-wide association studies☆67Updated 7 years ago
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- ☆36Updated 4 years ago
- Pan-transcriptomic phenotyping☆18Updated 2 weeks ago
- ☆23Updated last month
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- Robust Allele Specific Quantification and quality controL☆40Updated 3 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆53Updated 4 months ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆53Updated last month