Alternatives and similar repositories for manhplot:

Users that are interested in manhplot are comparing it to the libraries listed below

• myles-lewis / locuszoomr
  A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.
  ☆40Updated 2 weeks ago
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• kjgleason / Primo
  Primo
  ☆16Updated 3 years ago
• n-mounier / bGWAS
  R package to perform Bayesian Genome-Wide Association Studies
  ☆38Updated last year
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆51Updated 3 months ago
• ilarsf / gwasTools
  Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)
  ☆30Updated last year
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆27Updated 10 months ago
• juliedwhite / miamiplot
  An R package for creating ggplot2 based miami plots.
  ☆16Updated last week
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• bhattacharya-a-bt / isotwas
  ☆21Updated 2 months ago
• kaustubhad / fastman
  An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.
  ☆37Updated 3 months ago
• psoerensen / qgg
  Statistical tools for Quantitative Genetic Analyses
  ☆36Updated this week
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated 11 months ago
• pgxcentre / region-plot
  A tool to plot significant regions of GWAS
  ☆29Updated 2 years ago
• getian107 / SuSiEx
  Cross-population fine-mapping
  ☆34Updated 3 months ago
• hakyimlab / PredictDBPipeline
  ☆15Updated 4 years ago
• YinLiLin / SumTool
  Tool for GWAS summary-level data analysis
  ☆26Updated 4 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆44Updated last year
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆22Updated 4 years ago
• thewonlab / H-MAGMA
  ☆32Updated last year
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆22Updated 4 months ago
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆20Updated 7 years ago
• jrs95 / gassocplot
  Regional association plots
  ☆26Updated 11 months ago
• cuelee / pleio
  ☆18Updated last year
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆21Updated 2 years ago
• jinghuazhao / FM-pipeline
  A Fine-Mapping pipeline
  ☆19Updated 5 years ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆31Updated 4 years ago
• carlaml / LDpred-funct
  Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337
  ☆17Updated 6 months ago
• Geeketics / LocusZooms
  Make LocusZoom-like plots with your own LD matrix.
  ☆39Updated 2 years ago