Alternatives and similar repositories for manhplot

Users that are interested in manhplot are comparing it to the libraries listed below

• myles-lewis / locuszoomr
  A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.
  ☆50Updated 7 months ago
• Geeketics / LocusZooms
  Make LocusZoom-like plots with your own LD matrix.
  ☆47Updated 3 years ago
• opain / TWAS-plotter
  R script to make Manhattan-style plot for TWAS
  ☆41Updated 4 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆53Updated 4 months ago
• getian107 / SuSiEx
  Cross-population fine-mapping
  ☆37Updated 10 months ago
• hakyimlab / PredictDBPipeline
  ☆16Updated 4 years ago
• variani / finemapr
  Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF
  ☆34Updated 4 months ago
• psoerensen / qgg
  Statistical tools for Quantitative Genetic Analyses
  ☆38Updated 2 months ago
• pgxcentre / region-plot
  A tool to plot significant regions of GWAS
  ☆29Updated 2 years ago
• RajLabMSSM / echolocatoR
  Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
  ☆41Updated 2 years ago
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• fhormoz / caviar
  ☆63Updated 3 years ago
• bhattacharya-a-bt / isotwas
  ☆23Updated 3 months ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆33Updated 5 years ago
• brielin / Popcorn
  Software for estimating correlation of trait effect sizes across populations
  ☆50Updated 4 months ago
• totajuliusd / topr
  topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…
  ☆68Updated last year
• cuelee / pleio
  ☆19Updated 2 months ago
• juliedwhite / miamiplot
  An R package for creating ggplot2 based miami plots.
  ☆18Updated 7 months ago
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆22Updated 2 years ago
• wuyangf7 / OPERA
  This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…
  ☆36Updated last year
• opain / Calculating-FUSION-TWAS-weights-pipeline
  This is a pipeline for calculating weights for TWAS
  ☆32Updated 3 years ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆32Updated last year
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆41Updated 7 years ago
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 3 years ago
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆30Updated last year
• kjgleason / Primo
  Primo
  ☆16Updated 4 years ago
• jinghuazhao / INF
  SCALLOP-INF analysis
  ☆20Updated this week
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆24Updated 4 years ago
• gkichaev / PAINTOR_V3.0
  Fast, integrative fine mapping with functional data
  ☆60Updated 6 years ago