precimed / gsa-mixerLinks
☆20Updated 3 months ago
Alternatives and similar repositories for gsa-mixer
Users that are interested in gsa-mixer are comparing it to the libraries listed below
Sorting:
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆22Updated 3 months ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 3 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 10 months ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆37Updated 3 months ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 5 months ago
- MR-link-2: pleiotropy robust cis MR☆21Updated 4 months ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Updated 2 years ago
- ☆30Updated 4 years ago
- A powerful TWAS framework leveraging summary-level reference data☆32Updated 8 months ago
- Integration of TWAS and Colocalization Analysis☆17Updated last year
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆35Updated 5 months ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- ☆19Updated 4 months ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆12Updated 4 months ago
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆18Updated 2 years ago
- This is a pipeline for calculating weights for TWAS☆32Updated 3 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆57Updated 4 years ago
- GWAS summary statistics files QC tool☆42Updated last year
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- R script that performs gene-set or gene property analysis using TWAS results.☆32Updated last year
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆31Updated 3 weeks ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆19Updated 4 years ago
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- Create Regional Association Plots☆12Updated 3 months ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆36Updated 6 months ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Updated 5 months ago
- Tissue-Gene Fine-Mapping☆26Updated 9 months ago