yakneens / butlerLinks
Butler is a framework for running scientific workflows on public and academic clouds.
☆69Updated 5 years ago
Alternatives and similar repositories for butler
Users that are interested in butler are comparing it to the libraries listed below
Sorting:
- WDL plugin for pytest☆48Updated last year
- ☆87Updated last month
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- GA4GH Variation Representation Python Implementation☆57Updated this week
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 3 weeks ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆74Updated last week
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Accumulating container resource usage with workflow metadata☆19Updated 4 years ago
- APIs for discovering genomics tools, their metadata and their containers☆31Updated 7 months ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆43Updated last year
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 7 months ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- conda recipes for genomic data☆85Updated 3 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆69Updated 2 months ago
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆14Updated 4 years ago
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago
- The WES API is a standard way to run and manage portable workflows.☆85Updated 8 months ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- Genomics Research Container Architecture☆48Updated 5 years ago
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 7 years ago
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆26Updated last week
- ☆11Updated 8 years ago
- A cookiecutter template for Snakemake workflows☆59Updated 3 years ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago