yakneens / butlerLinks
Butler is a framework for running scientific workflows on public and academic clouds.
☆70Updated 5 years ago
Alternatives and similar repositories for butler
Users that are interested in butler are comparing it to the libraries listed below
Sorting:
- ☆92Updated 3 weeks ago
- The WES API is a standard way to run and manage portable workflows.☆86Updated 3 weeks ago
- Toil workflows for common genomic pipelines☆33Updated 6 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- WDL plugin for pytest☆49Updated 2 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 4 years ago
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆71Updated 2 months ago
- APIs for discovering genomics tools, their metadata and their containers☆33Updated 3 months ago
- Python Scientific Pipeline Management System☆71Updated 2 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆47Updated last month
- An app store for scientific workflows, tools, notebooks, and services☆130Updated last week
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 8 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆76Updated 2 weeks ago
- Accumulating container resource usage with workflow metadata☆19Updated 4 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆99Updated 7 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆37Updated 2 weeks ago
- Server wrapper that turns command line tools into web services☆60Updated 7 years ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆36Updated 7 months ago
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆75Updated 5 years ago
- Mulled - Automatized Containerized Software Repository☆66Updated last year
- Request for comments on interchangeable bioinformatics containers☆39Updated 6 years ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆71Updated 2 months ago
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Updated 6 years ago
- BioContainers specifications☆52Updated 2 years ago
- CWL for GDC DNASeq workflows☆23Updated last week
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Updated 5 months ago