Alternatives and similar repositories for butler

Users that are interested in butler are comparing it to the libraries listed below

• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated 2 years ago
• ga4gh / task-execution-schemas
  ☆92Updated last week
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆86Updated last month
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 7 years ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆35Updated 6 months ago
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆42Updated 2 years ago
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆71Updated last month
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆98Updated 2 years ago
• inutano / cwl-metrics
  Accumulating container resource usage with workflow metadata
  ☆19Updated 4 years ago
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 4 years ago
• Mizzou-CBMI / COSMOS2
  Python Scientific Pipeline Management System
  ☆71Updated 2 years ago
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆130Updated this week
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆60Updated 7 years ago
• BioContainers / mulled
  Mulled - Automatized Containerized Software Repository
  ☆66Updated last year
• broadinstitute / wdl
  Workflow Description Language - Specification and Implementations
  ☆27Updated 6 years ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• biocompute-objects / BCO_Documentation
  Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:
  ☆17Updated last year
• arq5x / cyvcf
  A fast Python library for VCF files leveraging Cython for speed.
  ☆52Updated 7 years ago
• common-workflow-lab / gxargparse
  Automated CWL and Galaxy XML generation for Python tools that use argparse and click
  ☆11Updated 6 years ago
• sbg / sevenbridges-python
  SevenBridges Python Api bindings
  ☆46Updated 9 months ago
• googlegenomics / pipelines-api-examples
  Examples for the Google Genomics Pipelines API.
  ☆50Updated 7 years ago
• ga4gh / tool-registry-service-schemas
  APIs for discovering genomics tools, their metadata and their containers
  ☆32Updated 3 months ago
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 8 years ago
• nmdp-bioinformatics / flow
  Consensus assembly and variant calling workflow.
  ☆12Updated 10 years ago
• ga4gh / data-repository-service-schemas
  A repository for the schemas used for the Data Repository Service.
  ☆63Updated 2 weeks ago
• BioContainers / specs
  BioContainers specifications
  ☆52Updated 2 years ago
• LANL-Bioinformatics / EDGE
  EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
  ☆75Updated 2 months ago