arunisaac / ravananLinks
High-reproducibility CWL runner powered by Guix
☆18Updated 3 weeks ago
Alternatives and similar repositories for ravanan
Users that are interested in ravanan are comparing it to the libraries listed below
Sorting:
- Functional highly reproducible bioinformatics pipelines☆96Updated 9 months ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆70Updated 5 years ago
- EDAM is an ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concept…☆134Updated last month
- RDF and SPARQL ideas to build on top of [odgi](https://github.com/pangenome/odgi)☆11Updated last year
- GNU-Make-like utility for managing builds and complex workflows☆110Updated 2 years ago
- guix packages for bioinformatics software☆23Updated last year
- ☆26Updated 6 years ago
- RNAlien - unsupervised RNA family model construction☆13Updated 4 years ago
- Workflows written in common workflow language (CWL)☆14Updated 7 years ago
- Bayesian co-estimation of phylogenies and multiple alignments via MCMC☆48Updated this week
- ☆73Updated 6 years ago
- GA4GH Beacon specification.☆33Updated 2 years ago
- Incremental construction of FM-index for DNA sequences☆72Updated last year
- Concise Common Workflow Language☆28Updated last week
- A python toolkit for building and querying multi-string BWTs☆27Updated 8 years ago
- De Bruijn graph representation in low memory☆35Updated last year
- BioDSL (pronounced Biodiesel) is a Domain Specific Language for creating bioinformatic analysis workflows.☆16Updated 7 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆21Updated 3 years ago
- Trigger CWL workflows via GA4GH WES and TES☆18Updated this week
- Cosmo is a fast, low-memory DNA assembler using a Succinct (variable order) de Bruijn Graph.☆53Updated last year
- GeneNetwork (2nd generation)☆38Updated this week
- Wiki form of BLAST documentation from NCBI☆16Updated 8 years ago
- FM-index representation of a de Bruijn graph☆27Updated 8 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆37Updated 3 weeks ago
- A repository for the schemas used for the Data Repository Service.☆63Updated this week
- Annotation of VCF variants with functional impact and from databases (executable+library)☆64Updated 3 weeks ago
- BWT-based index for graphs☆73Updated 9 months ago
- A fast, AVX2 and ARM Neon accelerated FM index library☆36Updated last year
- A genotype query interface.☆136Updated 4 years ago
- Substring index for paths in a graph☆60Updated last week