IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.
☆17May 5, 2026Updated 4 months ago
Alternatives and similar repositories for ipython2cwl
Users that are interested in ipython2cwl are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Workflows written in common workflow language (CWL)☆14Dec 15, 2018Updated 7 years ago
- CWL experimental grammar☆11Nov 16, 2025Updated 10 months ago
- Profile for provenance research object of a CWL workflow run☆20Dec 20, 2022Updated 3 years ago
- Data Profiling and Basic Quality Assessment tool, for the very beginning phase of your project.☆24May 27, 2024Updated 2 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆22Nov 7, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python utilities for CWL☆43Updated this week
- Common Workflow Language definition files for workflows introduced in DAT2☆11May 23, 2022Updated 4 years ago
- Yet Another CWL Engine by Golang☆18Mar 19, 2019Updated 7 years ago
- A translator from WDL to CWL v1.2☆28Jun 24, 2026Updated 2 months ago
- Weaver: Workflow Execution Management Service (EMS); Application, Deployment and Execution Service (ADES); OGC API - Processes; WPS; CWL …☆30Updated this week
- The WES API is a standard way to run and manage portable workflows.☆94Jun 11, 2026Updated 3 months ago
- Create cwl workflows by writing a simple Python script☆39Apr 29, 2020Updated 6 years ago
- An ontology of imaging and related techniques and technologies, image processing and analysis, image data and formats, within bio- and ot…☆12May 4, 2026Updated 4 months ago
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Aug 9, 2016Updated 10 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Write CWL in R☆15May 9, 2024Updated 2 years ago
- Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources☆30Nov 14, 2018Updated 7 years ago
- Literate Computing for Reproducible Infrastructure - Elasticsearch Practice☆21May 11, 2018Updated 8 years ago
- Trigger CWL workflows via GA4GH WES and TES☆18Jul 22, 2026Updated last month
- Automation of JupyterHub operations and testing☆14Aug 25, 2022Updated 4 years ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 4 years ago
- This repository contains the CWL description of the EBI Metagenomics pipeline☆21Apr 7, 2021Updated 5 years ago
- StreamFlow Workflow Manager☆65Updated this week
- Dockerfile for Literate Computing(for Reproducible Infrastructure)☆22Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R☆37Jan 28, 2022Updated 4 years ago
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆25Jul 6, 2021Updated 5 years ago
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆81Mar 25, 2025Updated last year
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated last year
- Visual and code editor for Common Workflow Language☆314Jan 11, 2023Updated 3 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆25Aug 11, 2026Updated last month
- High-reproducibility CWL runner powered by Guix☆26Sep 4, 2026Updated 2 weeks ago
- ☆11Dec 8, 2022Updated 3 years ago
- ☆13Sep 4, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 7 years ago
- Generic SDK and CLI for GA4GH API services☆15Feb 2, 2026Updated 7 months ago
- NBDC/DBCLS DeBioHackathon 2013☆18Jul 8, 2019Updated 7 years ago
- ☆12Apr 17, 2024Updated 2 years ago
- A tool for checking the validity of JSON-LD objects☆14Sep 29, 2023Updated 2 years ago
- Released CWL v1.2.1 specification☆45Aug 15, 2026Updated last month
- Typescript data model for Common Workflow Language☆52Mar 3, 2023Updated 3 years ago