Alternatives and similar repositories for NOVOLoci:

Users that are interested in NOVOLoci are comparing it to the libraries listed below

• nterhoeven / blast2bed
  convert a blast output to a bed file
  ☆12Updated 9 years ago
• IGDRion / ANNEXA
  Nextflow pipeline to extend reference annotation with nanopore reads, classify novel genes (mRNAs vs lncRNAs).
  ☆13Updated last week
• PacificBiosciences / pbipa
  Improved Phased Assembler
  ☆28Updated 3 years ago
• andreaminio / AnnotationPipeline-EVM_based-DClab
  Cantù Lab @ UC Davis - Annotation pipeline - EVM based
  ☆14Updated 5 months ago
• thackl / seq-scripts
  scripts for sequence and feature conversion, annotation, analysis ...
  ☆27Updated last month
• popitsch / nanopanel2
  Nanopanel2: a somatic variant caller for Nanopore panel sequencing data
  ☆9Updated 3 years ago
• skoren / triobinningScripts
  Scripts to reproduce TrioBinning manuscript
  ☆17Updated 5 years ago
• glarue / reciprologs
  Find reciprocal best hits (DIAMOND or BLAST) between two (or more!) sets of sequences.
  ☆13Updated 10 months ago
• sanger-tol / yahs
  Yet another Hi-C scaffolding tool
  ☆19Updated 6 months ago
• AnimalGenomicsETH / bovine-graphs
  Integrate multiple genome assemblies into a pangenome graph
  ☆34Updated 2 years ago
• almeidasilvaf / doubletrouble
  An R package to identify and classify duplicated genes from whole-genome protein sequence data
  ☆25Updated last month
• zheminzhou / pHierCC
  Hierarchical clustering of cgMLST
  ☆11Updated last year
• vpc-ccg / sedef
  Identification of segmental duplications in the genome
  ☆27Updated 3 years ago
• human-pangenomics / hprc-tutorials
  ☆17Updated last year
• at-cg / RAFT
  ☆23Updated 8 months ago
• lauguma / GWideCodeML
  A Python package for testing evolutionary hypotheses in genome-wide approaches.
  ☆31Updated 4 years ago
• mbhall88 / pistis
  Quality control plotting for long reads
  ☆10Updated 11 months ago
• elimoss / metagenomics_workflows
  Workflows for metagenomic sequence data processing and analysis.
  ☆17Updated 5 years ago
• hahnlab / CAGEE
  Computational Analysis of Gene Expression Evolution
  ☆40Updated 2 weeks ago
• TimothyStephens / Dinoflagellate_Annotation_Workflow
  Dinoflagellate Annotation Workflow
  ☆14Updated 2 years ago
• maxfieldk / TE-Seq
  Snakemake pipeline to analyze transposable element 'omics data.
  ☆18Updated 3 weeks ago
• almeidasilvaf / syntenet
  An R package to infer and analyze synteny networks from protein sequences
  ☆29Updated 4 months ago
• maickrau / ribotin
  ☆32Updated this week
• Rinoahu / SwiftOrtho
  A high performance tool to identify orthologs and paralogs across genomes.
  ☆26Updated 2 years ago
• alekseyzimin / EviAnn_release
  This is the standalone version of the EviAnn pipeline
  ☆28Updated 3 weeks ago
• cmdoret / tinycov
  Command line tool to plot genomic coverage from a BAM file
  ☆13Updated 2 years ago
• Serka-M / Digester-MultiSequencing
  Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing
  ☆21Updated 2 years ago
• ChnMasterOG / KmerGO
  KmerGO is a user-friendly tool to identify the group-specific sequences on two groups or trait-associated sequences of high throughput se…
  ☆13Updated 2 years ago
• douglasgscofield / hcluster
  My git clone of Heng Li's hcluster from http://sourceforge.net/p/treesoft/code/HEAD/tree/branches/lh3/
  ☆8Updated 2 years ago
• farhangus / Sniffles2_plot
  ☆29Updated 8 months ago