ndierckx / NOVOLociLinks
Haplotype-aware assembly of complex regions and small genomes
☆15Updated this week
Alternatives and similar repositories for NOVOLoci
Users that are interested in NOVOLoci are comparing it to the libraries listed below
Sorting:
- convert a blast output to a bed file☆12Updated 10 years ago
- Hierarchical clustering of cgMLST☆11Updated last year
- Command line tool to plot genomic coverage from a BAM file☆14Updated 2 years ago
- Nanopanel2: a somatic variant caller for Nanopore panel sequencing data☆11Updated 4 years ago
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Updated 10 months ago
- genome basic statistics tool (e.g. n50, n10, ng50,...)☆15Updated 13 years ago
- Yet another Hi-C scaffolding tool☆22Updated 10 months ago
- ☆11Updated 3 years ago
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆11Updated 4 years ago
- ☆16Updated 4 years ago
- Scaffolding with Ultralong Reads☆15Updated 4 years ago
- Scripts to reproduce TrioBinning manuscript☆17Updated 5 years ago
- plot genome alignment synteny☆21Updated 5 years ago
- Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing☆16Updated 7 years ago
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆11Updated 5 years ago
- Simple script to generate whole-genome coverage plots☆19Updated 10 years ago
- A method for measuring chromosome-specific telomere length from long reads☆22Updated last year
- Combine structural variation outputs from long sequencing reads into a superior call set☆18Updated last month
- Improved Phased Assembler☆28Updated 3 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- scripts for sequence and feature conversion, annotation, analysis ...☆28Updated 6 months ago
- ASTRAL for PaRalogs and Orthologs☆21Updated 3 years ago
- RRSelection: A linkage disequilibrium method to detect selection region across population VCF☆14Updated 6 years ago
- Workflows for metagenomic sequence data processing and analysis.☆16Updated 6 years ago
- ☆18Updated last year
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- methods for orphan gene prediction paper optimization☆25Updated 3 years ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files☆21Updated 2 years ago
- A simple-to-use tool for visualizing and comparing genome contexts for numerous genomes☆17Updated last year
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago