ndierckx / NOVOLociLinks
Haplotype-aware assembly of complex regions and small genomes
☆15Updated 2 months ago
Alternatives and similar repositories for NOVOLoci
Users that are interested in NOVOLoci are comparing it to the libraries listed below
Sorting:
- convert a blast output to a bed file☆12Updated 10 years ago
- Hierarchical clustering of cgMLST☆13Updated 2 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- Nanopanel2: a somatic variant caller for Nanopore panel sequencing data☆11Updated 4 years ago
- Command line tool to plot genomic coverage from a BAM file☆14Updated 2 years ago
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Updated last year
- plot genome alignment synteny☆21Updated 5 years ago
- ☆11Updated 3 years ago
- A method for measuring chromosome-specific telomere length from long reads☆22Updated last year
- interactive Multi Objective K-mer Analysis☆23Updated 2 years ago
- ☆12Updated last month
- Improved long-read assembly by preserving contained reads☆30Updated last year
- Improved Phased Assembler☆28Updated 3 years ago
- HiCBin: binning metagenomic contigs and recovering metagenome-assembled genomes using Hi-C contact maps☆14Updated 2 years ago
- Workflows for metagenomic sequence data processing and analysis.☆16Updated 6 years ago
- Combine structural variation outputs from long sequencing reads into a superior call set☆18Updated 6 months ago
- methods for orphan gene prediction paper optimization☆25Updated 4 years ago
- Repeat and haplotype aware error correction in nanopore sequencing reads with DeChat☆25Updated 9 months ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆22Updated 5 months ago
- A nextflow pipeline for polishing CLR assemblies☆18Updated 3 years ago
- Scaffolding with Ultralong Reads☆15Updated 5 years ago
- Scripts to reproduce TrioBinning manuscript☆17Updated 5 years ago
- ☆12Updated 5 years ago
- Consensus genome annotation using OMA☆31Updated 3 weeks ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- Simple script to generate whole-genome coverage plots☆19Updated 10 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆30Updated 5 months ago
- CDS prediction in transcripts☆24Updated 11 months ago
- An R package to infer and analyze synteny networks from protein sequences☆36Updated 6 months ago
- ☆15Updated 4 years ago